DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt5

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_062223.1 Gene:Syt5 / 54309 RGDID:3806 Length:386 Species:Rattus norvegicus


Alignment Length:275 Identity:102/275 - (37%)
Similarity:165/275 - (60%) Gaps:10/275 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 GNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFD 284
            |.|..||.||...|.|.|.:|:|:.|......|::|||..|.|||||:...:|::|::||||.|.
  Rat   110 GRLQYSLDYDFQTGQLLVGILQAEGLAALDLGGSSDPYVSVYLLPDKRRRHETKVHRQTLNPHFG 174

  Fly   285 EQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKV 349
            |.|.|:|....:..|.:.:.:||||.:||:..||..::.:::::|...::.|..|..|..::.: 
  Rat   175 ETFAFKVPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMSSVNLGRPVQAWRELQVAPKEEQE- 238

  Fly   350 DLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGT 414
            .||||..||.|:|:|.:|.|::::|:||:.: |....|||||||.|| .||||::|:||.:::.|
  Rat   239 KLGDICFSLRYVPTAGKLTVIVLEAKNLKKM-DVGGLSDPYVKVHLL-QGGKKVRKKKTTIKKNT 301

  Fly   415 LNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNS---PEVRTEEKIFFEEVF 476
            |||.||||.:|:|..:.::...:|.||:....||.:|.:||..:|.:   ..:|.    :.:.:.
  Rat   302 LNPYYNEAFSFEVPCDQVQKVQVELTVLDYDKLGKNEAIGRVAVGTAVGGAGLRH----WADMLA 362

  Fly   477 RAKNATAQWVPLQEP 491
            ..:...|||..|:.|
  Rat   363 NPRRPIAQWHSLRPP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 45/120 (38%)
C2B_Synaptotagmin 352..488 CDD:175975 53/138 (38%)
Syt5NP_062223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Syt1_2_N 6..76 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 108..230 CDD:176031 44/119 (37%)
C2B_Synaptotagmin-1 240..374 CDD:176047 54/139 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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