DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt5

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001347350.1 Gene:Syt5 / 53420 MGIID:1926368 Length:386 Species:Mus musculus


Alignment Length:328 Identity:113/328 - (34%)
Similarity:182/328 - (55%) Gaps:18/328 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 ARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPV 231
            |::..|:.......|..:..:..:::.      |.||.|.|.  ..||.....|.|..||.||..
Mouse    65 AQAQVHLQEVKELGRSYIDKVQPEIEE------LDRSPSMPG--QQVSDKHQLGRLQYSLDYDFQ 121

  Fly   232 GGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVI 296
            .|.|.|.:|:||.|......|::|||..|.|||||:...:|::|::||||.|.|.|.|:|....:
Mouse   122 TGQLLVGILQAQGLAALDLGGSSDPYVSVYLLPDKRRRHETKVHRQTLNPHFGETFAFKVPYVEL 186

  Fly   297 DKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYL 361
            ..|.:.:.:||||.:||:..||..::.:::::|...::.|..|..|..::.: .||||..||.|:
Mouse   187 GGRVLVMAVYDFDRFSRNDAIGEVRVPMSSVNLGRPVQAWRELQVAPKEEQE-KLGDICFSLRYV 250

  Fly   362 PSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFD 426
            |:|.:|.|::::|:||:.: |....|||||||.|| .||||::|:||.:::.||||.||||.:|:
Mouse   251 PTAGKLTVIVLEAKNLKKM-DVGGLSDPYVKVHLL-QGGKKVRKKKTTIKKNTLNPYYNEAFSFE 313

  Fly   427 VAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG---NSPEVRTEEKIFFEEVFRAKNATAQWVPL 488
            |..:.::...:|.||:....||.:|.:||..:|   ....:|.    :.:.:...:...|||..|
Mouse   314 VPCDQVQKVQVELTVLDYDKLGKNEAIGRVAVGAAVGGAGLRH----WADMLANPRRPIAQWHSL 374

  Fly   489 QEP 491
            :.|
Mouse   375 RPP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 46/122 (38%)
C2B_Synaptotagmin 352..488 CDD:175975 53/138 (38%)
Syt5NP_001347350.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Herpes_gI <3..64 CDD:332941
C2 108..230 CDD:326325 45/121 (37%)
C2 240..374 CDD:326325 54/139 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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