DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and syt4

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001164985.1 Gene:syt4 / 447980 XenbaseID:XB-GENE-5963049 Length:424 Species:Xenopus tropicalis


Alignment Length:51 Identity:11/51 - (21%)
Similarity:21/51 - (41%) Gaps:9/51 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LTFRDQVILLEESWAELFLLNAIQWCMPIDTTACTLFSLNEHCNSANNSGF 82
            :|..|..:..:|:...:..||.        |.|..:.:.|.|. :.:.:||
 Frog   161 VTQEDVELAYQEAMMNMARLNR--------TAAGLMHTFNAHA-ATDITGF 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033
C2B_Synaptotagmin 352..488 CDD:175975
syt4NP_001164985.1 C2A_Synaptotagmin-4-11 152..278 CDD:176034 11/51 (22%)
C2B_Synaptotagmin-4 287..422 CDD:176049
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.