DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt7

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster


Alignment Length:477 Identity:138/477 - (28%)
Similarity:218/477 - (45%) Gaps:89/477 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LAQIGVYASVSFLVVSAVGAALYTTCSKRYRLNWFEQNLLESANEKDEDQQREALVAGAVGYNVD 86
            ||.:|:..:::..:   .|..|:.. .||.:|.:.|.|         ||::..:....|....||
  Fly    10 LAILGLIITIALFL---AGGYLWWR-HKRSQLQFIEPN---------EDEESSSYSLRAAQDIVD 61

  Fly    87 NVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAPPTSPT--G 149
                       |||    .||..:         ||.:...|..:|..::..........:|.  |
  Fly    62 -----------SGN----PPTKPQ---------VPVAHAITTPLQNNINRKLNGFLSLRTPLIGG 102

  Fly   150 SLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPR-VSSMNAKLDHT-------KIDMT-LYRSHS 205
            |..|.|                         :|: :||:....|.|       .|.|| :|...:
  Fly   103 SGASQT-------------------------KPQIISSVGNPGDGTTKDSANKSISMTDMYLDST 142

  Fly   206 QPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFW 270
            .|        :|..|.:|.||.||.....|.:::|:.:.|..:..|||:|||.:|.||||||:..
  Fly   143 DP--------SENVGQIHFSLEYDFQNTTLILKVLQGKELPAKDLSGTSDPYVRVTLLPDKKHRL 199

  Fly   271 QTRIHKRTLNPVFDEQFVFE-VTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLK 334
            :|:|.:|||||.::|.|.|| .....:..|.:.:.::|:|.:||...||...|.|..:|.:.:..
  Fly   200 ETKIKRRTLNPRWNETFYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDFAGKQS 264

  Fly   335 LWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPG 399
            .|..|...:    |...|:::.||.|.||...|.:.|||||||: ..|....|||||||.|.. |
  Fly   265 FWKALKPPA----KDKCGELLSSLCYHPSNSILTLTLIKARNLK-AKDINGKSDPYVKVWLQF-G 323

  Fly   400 GKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLI-GNSPE 463
            .|:::||||.:...|||||:||:.:|:|..|.::.|.|:..|:....:|.:|::||.|: |.:..
  Fly   324 DKRVEKRKTPIFTCTLNPVFNESFSFNVPWEKIRECSLDVMVMDFDNIGRNELIGRILLAGKNGS 388

  Fly   464 VRTEEKIFFEEVFRAKNATAQW 485
            ..:|.|.:.:.:.:.:....||
  Fly   389 GASETKHWQDMISKPRQTVVQW 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 45/123 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 52/135 (39%)
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 45/123 (37%)
C2B_Synaptotagmin-7 277..414 CDD:176050 52/136 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468162
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
65.950

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