DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt1a

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001314758.1 Gene:syt1a / 436736 ZFINID:ZDB-GENE-040718-165 Length:419 Species:Danio rerio


Alignment Length:312 Identity:110/312 - (35%)
Similarity:179/312 - (57%) Gaps:14/312 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 DHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADP 256
            |..:..:|......:||.      .|..|.|..|:.|:.....|.|.:::|..|......||:||
Zfish   118 DDAETGLTDTEKEVEPKE------EEKLGKLQYSMDYNFTENTLIVGIIQAAELPAMDMGGTSDP 176

  Fly   257 YAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSK 321
            |.||.||||||..::|::|::||||||:|||.|:|....:..:|:.:.:||||.:|:|..||..|
Zfish   177 YVKVYLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYTELGGKTLVMTVYDFDRFSKHDAIGDVK 241

  Fly   322 LHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNS 386
            :.:..:|.|...:.|..|.||..::.: .||||..||.|:|:|.:|.||:::|:||:.: |....
Zfish   242 VPMNKVDFSHVTEEWRDLQSAEKEEQE-KLGDICFSLRYVPTAGKLTVVVLEAKNLKKM-DVGGL 304

  Fly   387 SDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSE 451
            ||||||:.|: ..||::||:||.:::.||||.|||:.:|:|..|.::...:..||:....:|.::
Zfish   305 SDPYVKIHLM-QNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVITVLDYDKIGKND 368

  Fly   452 ILGRTLIG-NSPEVRTEEKIFFEEVFRAKNATAQWVPL--QEPANNLATSAK 500
            .:|:..:| ||  ..||.:.:.:.:...:...|||..|  :|..:.|..:.|
Zfish   369 AIGKVFVGLNS--TGTELRHWSDMLANPRRPIAQWHVLKPEEEVDALLAAQK 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 48/122 (39%)
C2B_Synaptotagmin 352..488 CDD:175975 50/136 (37%)
syt1aNP_001314758.1 C2A_Synaptotagmin-1-5-6-9-10 139..261 CDD:176031 48/121 (40%)
C2B_Synaptotagmin-1 270..405 CDD:176047 51/138 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.820

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