DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and stac

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_651329.4 Gene:stac / 43002 FlyBaseID:FBgn0266719 Length:1153 Species:Drosophila melanogaster


Alignment Length:431 Identity:93/431 - (21%)
Similarity:172/431 - (39%) Gaps:117/431 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 TSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYC------STTSVPIARSDKHVVLAMHPSRPR 183
            :|.|.:::..|...|:|  ..||.|:|:.:..|.|      :|.|...:.|||.:..::..|.| 
  Fly    57 SSLAPLEENGSGGEEDS--DESPDGTLQLSQDSECTSIDTFATESTLASSSDKDISTSVLDSAP- 118

  Fly   184 VSSMNAKLDHTKIDMTLYRS----HSQPKTINPVSL--------NEVRGNLHVSLGY-DPVGGLL 235
              .||....:.:|...::.:    :::..|.:.|..        |.....::.:... :|....|
  Fly   119 --VMNVTDLYEEILFEIFNNIGCENNEECTNSLVEFVQDAFKIPNATHEEIYEAARLKEPPNVRL 181

  Fly   236 NVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRT 300
            ||.:::|:||..:..:|.:||:..:.|..:..:.:.:.:...||||:::|.|...:|....|   
  Fly   182 NVEIIKAENLMSKDSNGLSDPFVTLYLESNGSHRYNSSVKPATLNPIWEEHFSLPITENARD--- 243

  Fly   301 VEILL---YDFDA--------------------------------YSRH--VCIGGSKLHLANLD 328
             |:|:   :||||                                ..:|  ..||.:.:.|.::.
  Fly   244 -EVLIVEVWDFDAAETVKEKVNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIP 307

  Fly   329 LSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKA-RNLRIVDDARNSSDPYVK 392
            :| .|.:|..|...|....:   |.::|:||.  |||:...|.::. :||             :|
  Fly   308 VS-GLTVWYNLEKGSKGRSR---GSLLVNLAL--SAEKNKSVAVQEHKNL-------------LK 353

  Fly   393 VTLL-----------------GPGGKKIKKRKTGVQRGTLNPVYNEAL----AFDVAKETLKNCV 436
            :.|:                 .|..:.|:.:. ..|.| |.| ::.||    |:....||.|   
  Fly   354 LLLMYELETSQVANYWWSGKFSPNAELIRSQH-AAQSG-LTP-FDCALSQWHAYSTIHETHK--- 412

  Fly   437 LEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVFR 477
            |.||:.:..|.....::  |.:.|..|   :.|.|::.|.|
  Fly   413 LNFTLFNSILDVVVPVI--TYMQNDSE---DVKTFWDGVKR 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 33/160 (21%)
C2B_Synaptotagmin 352..488 CDD:175975 35/148 (24%)
stacNP_651329.4 C2 152..317 CDD:472691 33/169 (20%)
MUN <637..1003 CDD:461870
C2B_Munc13-like 990..1116 CDD:175976
Blue background indicates that the domain is not in the aligned region.

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