DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt14

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001262249.1 Gene:Syt14 / 40544 FlyBaseID:FBgn0261086 Length:648 Species:Drosophila melanogaster


Alignment Length:522 Identity:118/522 - (22%)
Similarity:193/522 - (36%) Gaps:116/522 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 AVGAALYTTCSKRY-------------RLNWFEQNLLESANEKDEDQQREALVAGAVGYNVDNVN 89
            ||......|..:||             ||.|.:|:.|   .||          .|..|..:...|
  Fly    62 AVKCVQKITRKRRYENTSSDSEEDILRRLRWHQQHQL---GEK----------PGGYGLGISQAN 113

  Fly    90 EVPRGKYSSGNAGNLSPTSLKSEDNDP-------AFWVPAS---VTSTAAIQQQVSN-------- 136
            .:....::...||..:.....:...||       ...:|:|   .:|..:::..|.:        
  Fly   114 PLTAQSFNYHQAGASADLQRVTVSRDPLAIAERGKVGIPSSHSECSSNDSMEVSVDSHTGVLTGL 178

  Fly   137 ---TTEESAPPT---SPTGS--LKSNTLSYCSTTSV---PIARSDKHVVLAM------------- 177
               ||....|.|   :|.|.  .|:..|.|....:|   |....::..||.:             
  Fly   179 SKATTTVPHPATAFRNPCGEHRAKTQALRYQHRVNVAAPPKLDKERDNVLVVPMVNAYSINNNNN 243

  Fly   178 -------HPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNE---VRG--NLHVSLGYDP 230
                   ||      |.|...|....|.:..||......:..|...|   .||  .|.:||.||.
  Fly   244 SITTSNNHP------SSNNNDDEPLFDTSDLRSIKSDDLLVGVDQKEPAVQRGPIELELSLLYDA 302

  Fly   231 VGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVF-EVTAG 294
            ....:.|.:::|:||.|.....|.....::.:||.||...:|:|.... ||.:.|.|:. .|...
  Fly   303 PMRKMTVHVMQAKNLPPLGSGQTTHTQVRMLMLPSKKQKLKTKIRSGE-NPQYMESFLLHRVNPE 366

  Fly   295 VIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPL-------------------- 339
            .::...:.:.||..:...:...||.:.:..|.:||..:..||.||                    
  Fly   367 DVNNMGLRVRLYGCERLRKERLIGEAYVSFATVDLELETNLWLPLEPRNTSSGLGSTSDLLSLAR 431

  Fly   340 --SSASAQDMK-VDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGK 401
              |:.|...|: ..:.::::.|:|.....||.|.:||....|.: ....:.|.|||:.::...|:
  Fly   432 SESAGSTSSMQHGGVSELLLGLSYNGVTGRLSVEIIKGSQFRSL-SLNKAPDTYVKMVMVSSIGQ 495

  Fly   402 KIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG----NSP 462
            :|.:.||.::||..||::.|..||.||...|.:..|..:|.....:..:|::|...:|    .|.
  Fly   496 EISRAKTSIRRGQPNPLFKETFAFQVALFQLNDVTLMISVYAKRHMKKNEMVGWFSLGLNSSGSE 560

  Fly   463 EV 464
            ||
  Fly   561 EV 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 35/147 (24%)
C2B_Synaptotagmin 352..488 CDD:175975 34/117 (29%)
Syt14NP_001262249.1 C2A_Synaptotagmin-14_16 291..413 CDD:176035 33/122 (27%)
C2B_Synaptotagmin-14_16 446..584 CDD:176053 34/118 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468169
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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