DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt1

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster


Alignment Length:427 Identity:136/427 - (31%)
Similarity:216/427 - (50%) Gaps:70/427 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 VPASVTSTAAIQQ--QVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSDKHV------VLA 176
            |.|...:.||.|:  ||.:||.      |.|...:.:|     ||:||:.:..:||      |:|
  Fly    52 VLAEKAAEAASQRIAQVESTTR------SATTEAQEST-----TTAVPVIKKIEHVGEVVTEVIA 105

  Fly   177 MHPSRPRVSSMN--------------------AKLDHTK-------IDM-------TLYRSHSQP 207
            .....|....:.                    .|...||       :||       :.|:...||
  Fly   106 ERTGLPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKDGKGKKGVDMKSVQLLGSAYKEKVQP 170

  Fly   208 K----TINPVSLNE-------VRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVR 261
            .    |.|....:|       ..|.|:..|.||.....|.|.:::|:.|......||:|||.||.
  Fly   171 DMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVY 235

  Fly   262 LLPDKKNFWQTRIHKRTLNPVFDEQFVFEVT--AGVIDKRTVEILLYDFDAYSRHVCIGGSKLHL 324
            ||||||..::|::|::||:|||:|.|.|:..  |..::| |:...::|||.:|:|..||..|:.|
  Fly   236 LLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNK-TLVFAIFDFDRFSKHDQIGEVKVPL 299

  Fly   325 ANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDP 389
            ..:||::.::.|..|.|...:..:..||||..||.|:|:|.:|.||:::|:||:.: |....|||
  Fly   300 CTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKM-DVGGLSDP 363

  Fly   390 YVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILG 454
            |||:.:: ..||::||:||.:::.||||.|||:.:|:|..|.::...|..|||....:|:||.:|
  Fly   364 YVKIAIM-QNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIG 427

  Fly   455 RTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQEP 491
            |.::| .....||.:.:.:.:...:...|||..|::|
  Fly   428 RCILG-CMGTGTELRHWSDMLASPRRPIAQWHTLKDP 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 48/124 (39%)
C2B_Synaptotagmin 352..488 CDD:175975 52/135 (39%)
Syt1NP_523460.2 Podoplanin 5..136 CDD:283467 21/94 (22%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 48/124 (39%)
C2B_Synaptotagmin-1 326..461 CDD:176047 53/137 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468158
Domainoid 1 1.000 68 1.000 Domainoid score I3464
eggNOG 1 0.900 - - E1_KOG1028
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
87.850

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