DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and btsz

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001247109.1 Gene:btsz / 3346167 FlyBaseID:FBgn0266756 Length:3734 Species:Drosophila melanogaster


Alignment Length:524 Identity:111/524 - (21%)
Similarity:189/524 - (36%) Gaps:153/524 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 REALVAGAVGYNVDNVNEVPRGKYSSGNA---GNLSPTSLKSEDND----PAFWVPASVTSTAAI 130
            |.:.|..|: |..|:.:|....::....:   .:|:|..:.:..|.    |...|.|.:|||...
  Fly  3164 RRSSVPDAI-YETDSSDEAASHQFGGARSTLPRSLNPNQVVASTNSLPRLPTTGVGAPITSTPKT 3227

  Fly   131 QQQVS-NTTEESAPPTSPTGSLKSNTL-------------------------------------- 156
            :.|.: |.|..:....|.|||.||...                                      
  Fly  3228 KSQSALNHTPSNLSTVSATGSAKSARYRSPGLAARAAAVSGAGGGSSGGVGVGASSGSTGKKLGA 3292

  Fly   157 ------------------------------------------------SYCSTTSVPIARSDKHV 173
                                                            |..|:.:.| .:||:.:
  Fly  3293 GFQFLYSKRDARKRLNMSAEEAKVAAEELSRSPVIGQRQADGSGSPIQSRASSETWP-TQSDEDI 3356

  Fly   174 --VLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLN 236
              ::|||.:|..:||:..:.:..   .::|....:.:....|    |:|.:..::.|:.....|.
  Fly  3357 DRLVAMHQNRSSLSSLGVRSESM---ASVYSGAGEGRYGTVV----VKGQVEFAMQYNYKLSALE 3414

  Fly   237 VRLLEAQNLQPRQFS-GTADPYAKVRLLPDKKNFW--QTRIHKRTLNPVFDEQFVFEVTAGVIDK 298
            |.::..::|...... ..:|||.||.|||||....  :|::.|.||||:|||...|......::.
  Fly  3415 VHVVRCKDLAAVDAKRNRSDPYVKVYLLPDKSKAGKRKTKVKKHTLNPIFDETMRFHTPISSLES 3479

  Fly   299 RTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASA--QDMKVDLGDIMVSLAYL 361
            ||:.:.::..|.:.|:..:|...::|...........|..|...|.  .::....|||:|.|.|:
  Fly  3480 RTLWLTVWHSDMFGRNDFLGEVSVNLQGRLFDNPQSQWYLLQERSEPFDEVATYRGDIVVGLKYI 3544

  Fly   362 P----------------------------------SAER------LMVVLIKARNLRIVDDARNS 386
            |                                  .:||      |.|::.:|::|..: .|..:
  Fly  3545 PPENIKSSFFSRGSSITGSSSNLRKFGGSIKSVASKSERTSKGGQLHVLVKEAKHLSPI-KANGT 3608

  Fly   387 SDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAF-DVAKETLKNCVLEFTVVHDGLLGSS 450
            .|.:.|..|| |...:..|:||.|.:.||:|.:|....: ||:.|.|....||.||.....|.|:
  Fly  3609 CDAFCKSYLL-PDRTRSSKQKTPVVKRTLHPSWNYTFVYEDVSLEELSERALELTVWDHDRLASN 3672

  Fly   451 EILG 454
            |.:|
  Fly  3673 EFVG 3676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 34/125 (27%)
C2B_Synaptotagmin 352..488 CDD:175975 39/144 (27%)
btszNP_001247109.1 FYVE_Slp3_4_5 26..73 CDD:277286
SOBP <300..476 CDD:291927
C2A_SLP 3398..3520 CDD:176056 32/121 (26%)
C2B_SLP_1-2-3-4 3534..3723 CDD:175987 39/145 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.