DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt12

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001259513.1 Gene:Syt12 / 32290 FlyBaseID:FBgn0261085 Length:787 Species:Drosophila melanogaster


Alignment Length:466 Identity:123/466 - (26%)
Similarity:193/466 - (41%) Gaps:85/466 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 EVPRGKYS---------SGN----AGNLSPTSLKSED-NDPAFWVPASVTSTAAIQQQVS----- 135
            |.|.|..|         :||    ..:||...||..: .:|...:...|.....:|:.:|     
  Fly   315 ETPNGPISTDTPSTIHHNGNPFVERESLSSRLLKIHNTTNPFTGLSQRVKGPHLLQKTISEDYLF 379

  Fly   136 -----NTTEESAPPTSP-----------TGSLKSNTLSYCSTTSVPIA---RSDKHVVLAMHP-S 180
                 |....:...|.|           |.|...:.|...||.|:.:.   |:...|.|..|. |
  Fly   380 RKLGVNCPMANGNGTGPGSGHVNGNGNGTWSFGRSLLRQDSTLSLGMGLGRRNSSQVSLDSHAGS 444

  Fly   181 RPRVSSMNA-------KLDHTKIDMTLYRSH-SQPKTINPVSLNEVRGNLHVSLGYDPV-----G 232
            .|  .||:.       ..|....|.||:... .||.|       ::.|.|.|.|.||.:     |
  Fly   445 VP--GSMDGINLERAISCDSVTSDSTLFLDQLDQPYT-------QITGYLCVGLNYDQMSISNEG 500

  Fly   233 GLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVID 297
            ..|.|.:|||:.|.......:.|.:.::.|:||.....||::.|.||.|.::|.|.|     .:.
  Fly   501 MELTVSVLEAKGLICPFSVESLDTFVRIYLVPDHPGAMQTKVVKGTLTPSYNESFDF-----WLH 560

  Fly   298 KRTVEILLYDFDAYSR---HVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLA 359
            ||.....|: |..|..   |..||.:::.:.  ::...:..|.|||  .::......|::|.||:
  Fly   561 KRQARHSLW-FHLYHNGPAHTLIGEAEMEIG--EMPRPITTWIPLS--DSRKCNARWGELMFSLS 620

  Fly   360 YLPSAERLMVVLIKARNLRI------VDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPV 418
            |||:||||.:|::|||||::      .:.|......:|||.|:....|.:||| |.::|...:|:
  Fly   621 YLPTAERLTIVVVKARNLKLDGEQPAPESAETVHSVFVKVYLMDKDRKVLKKR-TSLKRKDRSPI 684

  Fly   419 YNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEI-LGRTLIGNSPEVRTEEKIFFEEVFRAKNAT 482
            :||::.|.|...:|....|..||.  |:..|... ||. ::..|..|....:.:.:.:...:...
  Fly   685 FNESMIFSVPPPSLTTTQLRVTVF--GVTTSGVTPLGH-IVAGSCAVGKGLRHWHQMLSSLRKPV 746

  Fly   483 AQWVPLQEPAN 493
            |.|..|:...|
  Fly   747 AMWHVLRRAVN 757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 37/130 (28%)
C2B_Synaptotagmin 352..488 CDD:175975 45/142 (32%)
Syt12NP_001259513.1 C2 503..602 CDD:278593 28/106 (26%)
C2B_Synaptotagmin-12 612..753 CDD:176051 45/144 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468153
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10024
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.850

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