DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and PCLO

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_054213895.1 Gene:PCLO / 27445 HGNCID:13406 Length:5204 Species:Homo sapiens


Alignment Length:335 Identity:71/335 - (21%)
Similarity:144/335 - (42%) Gaps:75/335 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 VNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQ---VSNTTEES----APPT 145
            ::|.|:....:.:.| :.|..|.:|            ....::||.   :|:..|:.    :.||
Human  4605 LHEPPKAVDKAKSPG-VDPKQLAAE------------LQKVSLQQSPLVLSSVVEKGSHVHSGPT 4656

  Fly   146 SPTGSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTI 210
            |            ..::|||            .|.:|...|::.|          ....|:|...
Human  4657 S------------AGSSSVP------------SPGQPGSPSVSKK----------KHGSSKPTDG 4687

  Fly   211 NPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFW----- 270
            ..|..:.:.|.:.:.:.|| :|.|: :.:|:|:||.||..:|.:||:.||.|||.:....     
Human  4688 TKVVSHPITGEIQLQINYD-LGNLI-IHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNA 4750

  Fly   271 ------QTRIHKRTLNPVFDEQFVFE-VTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLD 328
                  :|:..:::|||.:::..::: ::...:.|:|:|:.::|:|.:|.:..:|...:.|::..
Human  4751 SAEYKRRTKHVQKSLNPEWNQTVIYKSISMEQLKKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTS 4815

  Fly   329 LSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIV-DDARNSSDPYVK 392
            ..:....|.||..   |...:|.|.   |.:...|.:.....:||:|:..|. |.:::...|.::
Human  4816 HLDNTPRWYPLKE---QTESIDHGK---SHSSQSSQQSPKPSVIKSRSHGIFPDPSKDMQVPTIE 4874

  Fly   393 VTLLGPGGKK 402
            .:...||..|
Human  4875 KSHSSPGSSK 4884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 34/134 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 12/52 (23%)
PCLOXP_054213895.1 PRK07764 <32..411 CDD:236090
PHA03247 <309..905 CDD:223021
FYVE1_PCLO 587..648 CDD:277313
kgd 947..>1027 CDD:476867
FYVE2_PCLO 1057..1120 CDD:277315
PTZ00121 <1157..1700 CDD:173412
PRK10263 3461..>3966 CDD:236669
PDZ_RIM-like 4493..4588 CDD:467198
C2A_RIM1alpha 4695..4827 CDD:175997 33/133 (25%)
C2 5087..5196 CDD:425499
Blue background indicates that the domain is not in the aligned region.

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