DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Sytl5

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_808372.1 Gene:Sytl5 / 236643 MGIID:2668451 Length:753 Species:Mus musculus


Alignment Length:515 Identity:116/515 - (22%)
Similarity:200/515 - (38%) Gaps:125/515 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 SANEKDEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGN----LSPTSLKSE------DNDPA 117
            |.|.::...:....:|     .::|..|.....:....:|.    :|.|||.||      |...:
Mouse   273 SINSREHGFENSMALA-----TIENTCEELTKSHRRNTSGTPSIAVSGTSLSSERSRSEVDLSES 332

  Fly   118 FWVPASVTST-------AAIQQQVSN--TTEESAPPTSPTGSLKSNTL-SYCSTTSVPIARSDKH 172
            |......||:       .|:.:.:::  .||:.....|...|..:::| |..||.|.  |.||: 
Mouse   333 FAEDLEDTSSIRSRSVPGALDKDLNSLEDTEDGVDLVSSRFSANTHSLASGLSTNSQ--AGSDR- 394

  Fly   173 VVLAMHPSRPRVSSMNAKLDHTKID--MTLYRSHSQPKTINPVSLNEVRGN--LHVSLGYDPVGG 233
                   .|..::..:|..|.|.::  |::|........:      :|.|.  ||:|..| ..||
Mouse   395 -------KRSYLNVPDADSDTTSLNSMMSVYSETGDYGNV------KVTGEILLHISYCY-KTGG 445

  Fly   234 LLNVRLLEAQNL----QPRQFSGTADPYAKVRLLPDK--KNFWQTRIHKRTLNPVFDEQFVFEVT 292
            |. :.:...:||    :.:|   ..|.|.|..|||||  .|..:|:|...| ||.|:|...:.::
Mouse   446 LY-IFVKSCRNLATGDEKKQ---RTDAYVKSYLLPDKSRNNKRKTKIRTGT-NPEFNETLKYTIS 505

  Fly   293 AGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDL------ 351
            ...::.||:::.::.:|.:.|:..:|..::...:.:.......|..|..      ||:|      
Mouse   506 HTQLETRTLQLSVWHYDRFGRNSFLGEVEIAFDSWNFENPCDEWFVLQP------KVELAPDISL 564

  Fly   352 ---GDIMVSLAYLPSAERLM-----------------------------VVLIKARNLRIVDDAR 384
               |::.:.|.|:|..|.|:                             |.:.||:||..|... 
Mouse   565 QYKGELTIVLRYIPPEENLIFPAGQRQEKKIFKRGKKKESSSISGGILEVFIKKAKNLTAVKSG- 628

  Fly   385 NSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFD-VAKETLKNCVLEFTVVHDGLLG 448
            .:||.:||..|| |...|..|.||.|.:.::||.:|....|. :..:.:||..||.|:.......
Mouse   629 GTSDSFVKGYLL-PDDNKATKHKTAVVKKSVNPEWNHTFIFSGLYPQDIKNACLELTIWDKEAFS 692

  Fly   449 SSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVP--------LQEPANNLATSAK 500
            |:..||...:.:...:             :...|..|:.        .|:.|:|..||.:
Mouse   693 SNVFLGGVRLNSGSGM-------------SYGKTVDWMDSHGEEQRLWQKMADNPGTSVE 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 35/130 (27%)
C2B_Synaptotagmin 352..488 CDD:175975 38/173 (22%)
Sytl5NP_808372.1 PHD_SF 11..123 CDD:419867
FYVE_Slp5 62..108 CDD:277305
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..279 2/5 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..359 12/61 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 380..404 9/33 (27%)
C2A_SLP-4_5 430..553 CDD:175995 33/128 (26%)
C2B_SLP_1-2-3-4 567..745 CDD:175987 43/188 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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