DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt11

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_061274.2 Gene:Syt11 / 229521 MGIID:1859547 Length:430 Species:Mus musculus


Alignment Length:481 Identity:131/481 - (27%)
Similarity:216/481 - (44%) Gaps:72/481 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DISLAQIGVYASVSFLVVSAVGAALYTTC----SKRYRLNWFE-QNLLESANEKDEDQQREALVA 78
            |:|....|:..:...:|..:|...::|.|    .|:::...:: .::|:..:...|....:..: 
Mouse    12 DVSPVAAGLIGASVLVVCVSVTVFVWTCCHQQAEKKHKTPPYKFIHMLKGISIYPETLSNKKKI- 75

  Fly    79 GAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAP 143
                ..|....:.||.:...||....:.:.|.|.|.||....|||......|::....  |..:|
Mouse    76 ----IKVRRDKDGPRRESGRGNLLINAESGLLSHDKDPRGPSPASCMDQLPIKRDYGE--ELRSP 134

  Fly   144 PTSPT-GSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQP 207
            .||.| |..|                       |..||.|....|...|       |....::.|
Mouse   135 MTSLTPGESK-----------------------ATSPSSPEEDVMLGSL-------TFSVDYNFP 169

  Fly   208 KTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQT 272
            |....|::.|..|.        ||              ...|..| :|||.|:.:||||::..:|
Mouse   170 KKALVVTIQEAHGL--------PV--------------MDDQTQG-SDPYIKMTILPDKRHRVKT 211

  Fly   273 RIHKRTLNPVFDEQFVF-EVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSE-QLKL 335
            |:.::||:|||||.|.| .:....:....:..|:..||.:||...||...:.||.:|.|. :::|
Mouse   212 RVLRKTLDPVFDETFTFYGIPYSQLQDLVLHFLVLSFDRFSRDDVIGEVMVPLAGVDPSTGKVQL 276

  Fly   336 WTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGG 400
            ...:...:.|.. :..|::.|||:|.|.|:|:.||::|||:|..:|....|.:|||||.:. .|.
Mouse   277 TRDIIKRNIQKC-ISRGELQVSLSYQPVAQRMTVVVLKARHLPKMDITGLSGNPYVKVNVY-YGR 339

  Fly   401 KKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEVR 465
            |:|.|:||.|::.|||||:||:..:|:..:.|.:..:||.|:.......:|::||.::| :..|.
Mouse   340 KRIAKKKTHVKKCTLNPVFNESFIYDIPTDLLPDISIEFLVIDFDRTTKNEVVGRLILG-AHSVT 403

  Fly   466 TEEKIFFEEVFRA-KNATAQWVPLQE 490
            |.....:.||..: :...|:|..|.|
Mouse   404 TSGAEHWREVCESPRKPIAKWHSLSE 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 36/124 (29%)
C2B_Synaptotagmin 352..488 CDD:175975 50/136 (37%)
Syt11NP_061274.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..120 12/40 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..152 9/42 (21%)
C2A_Synaptotagmin-4-11 157..282 CDD:176034 42/154 (27%)
C2B_Synaptotagmin-4 291..428 CDD:176049 50/138 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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