DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Pla2g4b

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_663353.3 Gene:Pla2g4b / 211429 MGIID:2384819 Length:791 Species:Mus musculus


Alignment Length:159 Identity:36/159 - (22%)
Similarity:71/159 - (44%) Gaps:11/159 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 LLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDK 298
            ||.||:|.|..|..:....::|.|..:.|.....:..|||..|.:.|||:::.|.|.:...:  |
Mouse    19 LLTVRVLRASGLPSKDLVTSSDCYVTLNLPTASSHTLQTRTVKNSRNPVWNQNFHFRIHRQL--K 81

  Fly   299 RTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPS 363
            ..:|:.::|.|..:|...:......:..|.:..|.:.:: |.:.....::|:.     .|..|..
Mouse    82 NVMELKVFDHDLVTRDDPVLSVLFDVGTLQIGTQRQSFS-LGTQEKGCLEVEF-----RLQTLTD 140

  Fly   364 AERLMVV--LIKARNLRIVD-DARNSSDP 389
            .|..::.  ::.||.|..:. :.:.:.||
Mouse   141 CEEQLISNGIVVARELSCLHVELKRTGDP 169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 27/106 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 8/41 (20%)
Pla2g4bNP_663353.3 C2_cPLA2 19..137 CDD:176001 29/125 (23%)
Patatin_and_cPLA2 250..779 CDD:299702
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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