DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt1

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_033332.1 Gene:Syt1 / 20979 MGIID:99667 Length:421 Species:Mus musculus


Alignment Length:301 Identity:109/301 - (36%)
Similarity:173/301 - (57%) Gaps:12/301 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 KLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTA 254
            |.|..:..:|......:||.      .|..|.|..||.||.....|.|.:::|..|......||:
Mouse   119 KDDDAETGLTDGEEKEEPKE------EEKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTS 177

  Fly   255 DPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGG 319
            |||.||.||||||..::|::|::||||||:|||.|:|....:..:|:.:.:||||.:|:|..||.
Mouse   178 DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGE 242

  Fly   320 SKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDAR 384
            .|:.:..:|.....:.|..|.||..::.: .||||..||.|:|:|.:|.||:::|:||:.: |..
Mouse   243 FKVPMNTVDFGHVTEEWRDLQSAEKEEQE-KLGDICFSLRYVPTAGKLTVVILEAKNLKKM-DVG 305

  Fly   385 NSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGS 449
            ..||||||:.|: ..||::||:||.:::.||||.|||:.:|:|..|.::...:..||:....:|.
Mouse   306 GLSDPYVKIHLM-QNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGK 369

  Fly   450 SEILGRTLIG-NSPEVRTEEKIFFEEVFRAKNATAQWVPLQ 489
            ::.:|:..:| ||  ...|.:.:.:.:...:...|||..||
Mouse   370 NDAIGKVFVGYNS--TGAELRHWSDMLANPRRPIAQWHTLQ 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 49/122 (40%)
C2B_Synaptotagmin 352..488 CDD:175975 49/136 (36%)
Syt1NP_033332.1 Syt1_N 5..112 CDD:409248
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 112..141 5/27 (19%)
Phospholipid binding. /evidence=ECO:0000305 135..381 98/254 (39%)
C2A_Synaptotagmin-1-5-6-9-10 142..264 CDD:176031 49/121 (40%)
C2B_Synaptotagmin-1 273..408 CDD:176047 50/138 (36%)
Blue background indicates that the domain is not in the aligned region.

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