DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Syt17

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_620204.1 Gene:Syt17 / 192189 RGDID:708576 Length:474 Species:Rattus norvegicus


Alignment Length:446 Identity:139/446 - (31%)
Similarity:221/446 - (49%) Gaps:67/446 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ANEKDEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVT--S 126
            :|:||.|             :|...::||           |:|.:     |.|.....:|.|  |
  Rat    66 SNDKDGD-------------SVHTASDVP-----------LTPRT-----NSPDGRRSSSDTSKS 101

  Fly   127 TAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSDKHVVLA--------MHPSRPR 183
            |.::.:::|:.  :|..|:||...:|.......|....||..|    ||.        .....||
  Rat   102 TYSLTRRISSL--DSRRPSSPLIDIKPIEFGVLSAKKEPIQPS----VLRRTYTPDDYFRKFEPR 160

  Fly   184 VSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQP- 247
            :.|:::.||  .:|     |.:..:.::...|    |.||.|..||.:...|.||::||::|.| 
  Rat   161 LYSLDSNLD--DVD-----SLTDEEIMSKYQL----GMLHFSTQYDLLHNHLTVRVIEARDLPPP 214

  Fly   248 ------RQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLY 306
                  ||....::||.|:.||||:||..||.:.::|..|||:|::.||:......:||:.:.:.
  Rat   215 ISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVV 279

  Fly   307 DFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVL 371
            |||.:|||..||...:.|..:||.:....|..|..:|..:  |:||::::||.|||||.||.|.:
  Rat   280 DFDKFSRHCVIGKVAVPLCEVDLVKGGHWWKALIPSSQNE--VELGELLLSLNYLPSAGRLNVDI 342

  Fly   372 IKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCV 436
            |:|:.| :..|....|||:||:.|: .|.|.:|.:||...|||::|.|||:.:|.|.:|.|:|..
  Rat   343 IRAKQL-LQTDVSQGSDPFVKIQLV-HGLKLVKTKKTSFLRGTIDPFYNESFSFKVPQEELENAS 405

  Fly   437 LEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQEPA 492
            |.|||....:..|::.:||.:||......:|...:...:...:.|..||..|:..|
  Rat   406 LVFTVFGHNMKSSNDFIGRIVIGQYSSGPSESNHWRRMLNTHRTAVEQWHSLRSRA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 48/129 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 51/135 (38%)
Syt17NP_620204.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..117 17/81 (21%)
C2A_Synaptotagmin-15-17 186..314 CDD:176036 48/127 (38%)
C2B_Synaptotagmin-17 323..457 CDD:176055 51/135 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.780

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