DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and snt-2

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_497261.2 Gene:snt-2 / 185680 WormBaseID:WBGene00004922 Length:369 Species:Caenorhabditis elegans


Alignment Length:366 Identity:104/366 - (28%)
Similarity:177/366 - (48%) Gaps:34/366 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 TGSLKSNTLSYCSTTSVPIARS----------DKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYR 202
            ||::..:.:....:|..||.|.          .|||.:. :.:.|.:||....:..|..|     
 Worm     4 TGAIVCSPVFRILSTCCPIRRGVPTSNGYHPRPKHVDIG-NGAVPILSSKPITVQPTNSD----- 62

  Fly   203 SHSQPKTIN----PVS----LNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAK 259
             :.:|  :|    |:|    |.:..||:|..:.||.....|:|.::.|.:|.....:|.:|||.|
 Worm    63 -YYEP--VNNGTLPLSSSGALIKQYGNIHFRVEYDFEQSKLSVTIVSASDLPAMDRNGMSDPYVK 124

  Fly   260 VRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHL 324
            |.:||::|..::|||.:.||||.::|.|.|.:....:..:|:.:::||:|..|:...:|...:.|
 Worm   125 VYVLPERKQKFETRIIRNTLNPTYNETFQFSIPFNELHSKTLMLVVYDYDRLSKDDKMGQLSVPL 189

  Fly   325 ANLDLSEQLKLWTPLSSASAQDMK-VDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSD 388
            .::|......:..||......|.| ..||||..|..|.|:...:.:.:::||||:.: |...|||
 Worm   190 ESIDFGITTDIERPLQKPEKDDEKECRLGDICFSTRYRPATGTVTLTIMEARNLKKM-DVGGSSD 253

  Fly   389 PYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEIL 453
            ||||: .|..|.|.:.|:||..:..||||.|||:..|.:....::...|..:|.....:..::.:
 Worm   254 PYVKI-YLHHGRKLLSKKKTSRKYKTLNPYYNESFQFKIEPHMIEKVHLIVSVWDYDKMSKNDFI 317

  Fly   454 GRTLIG----NSPEVRTEEKIFFEEVFRAKNATAQWVPLQE 490
            |...:|    |.|::.......:.|:..::....||..|||
 Worm   318 GEVTLGSKHLNLPQITHACSEQWAEMMTSRRPVVQWHTLQE 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 38/122 (31%)
C2B_Synaptotagmin 352..488 CDD:175975 41/139 (29%)
snt-2NP_497261.2 C2 85..206 CDD:301316 38/120 (32%)
C2B_Synaptotagmin-1 217..357 CDD:176047 42/141 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

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