DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and snt-6

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001254022.1 Gene:snt-6 / 182427 WormBaseID:WBGene00004926 Length:373 Species:Caenorhabditis elegans


Alignment Length:298 Identity:93/298 - (31%)
Similarity:158/298 - (53%) Gaps:28/298 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 RPRV--SSMNAKLDHTKIDMTLYRSHSQP----KT-----INPVSLNEVRGNLHVSLGYDPVGGL 234
            ||.|  .::...::..|:..:|....||.    ||     :.|..::|.||.::.|:.::.....
 Worm    53 RPEVLAPTLTVDMESRKVQPSLKARLSQSINPWKTSIIDQLRPEVVSEFRGRINFSVAFEKECST 117

  Fly   235 LNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKR 299
            |:|.|:||.:|..:.|:|::|||.:..||.|.....::::|:|.|||.|:|...|.   |...|:
 Worm   118 LHVHLMEAVDLPVKDFTGSSDPYVRAFLLQDPGQSERSKVHRRNLNPTFNETLSFR---GHSMKK 179

  Fly   300 ----TVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAY 360
                |:.:.:.|:|.:|....||...|.|.::........|..|...:..  |...|:||:||.|
 Worm   180 LHDMTLVLQVMDYDRFSSDDPIGEILLPLKHVKFESSPVYWKHLQRPTVS--KDACGEIMISLCY 242

  Fly   361 LPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAF 425
            ||::.::.|.:||||:|...|..|: .|.|||:.:: ..|.|::||||.|:..|.:|::||:.||
 Worm   243 LPTSGKITVSIIKARDLHAKDRTRH-YDTYVKMWMV-QQGNKLEKRKTSVKPHTPSPIFNESFAF 305

  Fly   426 DV-AKETL---KNCVLEFTVVHDGLLGSSEILGRTLIG 459
            .: .|:.|   .|.||  |.:...::||:|.:|..::|
 Worm   306 SIPVKQVLLAEVNLVL--TAMEYDVIGSNEEIGHVIVG 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 37/126 (29%)
C2B_Synaptotagmin 352..488 CDD:175975 44/112 (39%)
snt-6NP_001254022.1 C2 101..225 CDD:387358 37/126 (29%)
C2B_Synaptotagmin 234..369 CDD:175975 44/112 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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