DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and snt-5

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_503409.1 Gene:snt-5 / 178631 WormBaseID:WBGene00004925 Length:458 Species:Caenorhabditis elegans


Alignment Length:422 Identity:116/422 - (27%)
Similarity:186/422 - (44%) Gaps:94/422 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 FWVPASVTSTAAI--------------QQQVSNTTEESAPPTS-------------------PTG 149
            :||..::.|..|:              .:|:....:.|..|||                   ..|
 Worm     6 WWVLVAILSLCAVILSSCALYFGARICVRQIKRKVKYSEVPTSVPEIKVSVPQSASTLSISKMNG 70

  Fly   150 SLKSNTLSY--C-----------STTSVP------IARSDKHVVLAMHPSRPRVSSMNAKLDHTK 195
            |.::..||.  |           ||.|.|      .:.||...:|...|.  ..|||       :
 Worm    71 SYRARVLSRNGCSPPWMDRNFETSTRSSPCTSPAIASTSDSCELLGDDPR--SASSM-------R 126

  Fly   196 IDMTLYRSHSQPKTINPV-SLNE------------------VRGNLHVSLGYDPVGGLLNVRLLE 241
            ..|.|:.....|:.|:.: .::|                  :||.|..:|.||.:..:|.:.::.
 Worm   127 NSMFLFNVDGNPEVIDEMEDIDERSVMHYELGFYDKTDGGCIRGTLTFALRYDFIHRVLMLHVIR 191

  Fly   242 AQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLY 306
            |.||.......|.|||.|:.|||:::...:|||.|:|.:|.|:|.|.|:|:...:..|.::..:|
 Worm   192 ANNLPVEDKGVTVDPYVKMYLLPERRGHCKTRICKKTNDPEFNEMFSFDVSFNNLANRMLQFTVY 256

  Fly   307 DFDAYSRHVCIGGSKLHLANLDLSEQ--LKLWTPLS-SASAQDMKVDLGDIMVSLAYLPSAERLM 368
            |||.::||..||    ::...||.|:  |..||..: ...|...|.|.||:::.|.|....|:|.
 Worm   257 DFDRFTRHGLIG----NIIMRDLFEKSDLYTWTEYTMHIVASQNKNDYGDLLLFLTYSNQEEKLY 317

  Fly   369 VVLIKARNLRIVDDARNSSDPYVKV--TLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKET 431
            :.:.||.|||.: |...:||||||:  |.   .||:.|.:|:..:|..||||::|.|.||:....
 Worm   318 INVSKAYNLRPM-DITGASDPYVKIEQTF---NGKRFKSKKSSTKRANLNPVFHETLVFDIPSSQ 378

  Fly   432 LKNCVLEFTVVHDGLLGSSEILGRTLIG-NSP 462
            :....:...|:....:|..::||..::| :||
 Worm   379 IAETNILIQVMDWDRIGKDDLLGCCILGKDSP 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 44/125 (35%)
C2B_Synaptotagmin 352..488 CDD:175975 39/114 (34%)
snt-5NP_503409.1 C2 169..277 CDD:301316 40/111 (36%)
C2B_Synaptotagmin 301..442 CDD:175975 39/114 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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