DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and snt-1

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_495394.3 Gene:snt-1 / 174120 WormBaseID:WBGene00004921 Length:443 Species:Caenorhabditis elegans


Alignment Length:283 Identity:104/283 - (36%)
Similarity:168/283 - (59%) Gaps:14/283 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 EVR-GNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLN 280
            ||: |.:...|.||...|.|.|.:::|::|.....|||:|||.|:.|||:||...:|::|::|||
 Worm   157 EVKLGRIQYKLDYDFQQGQLTVTVIQAEDLPGMDMSGTSDPYVKLYLLPEKKKKVETKVHRKTLN 221

  Fly   281 PVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLS-SASA 344
            |||:|.|:|:|....|..:|:...:||||.:|:|..||...:.|..:||...::.|..:: ....
 Worm   222 PVFNETFIFKVAFNEITAKTLVFAIYDFDRFSKHDQIGQVLIPLGKIDLGAVIEEWKDIAPPPDD 286

  Fly   345 QDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTG 409
            ::.:..||||..||.|:|:|.:|.||:::|:||:.: |....||||||:.:.|...|::||:||.
 Worm   287 KEAEKSLGDICFSLRYVPTAGKLTVVILEAKNLKKM-DVGGLSDPYVKLEMFGEDRKRLKKKKTN 350

  Fly   410 VQRGTLNPVYNEALAFD-VAKETLKNCVLEFTVVHDGLLGSSEILGRTLI---GNSPEVRTEEKI 470
            ::|.||||.:||:..|| :....:|...|..||:....|||::.:||.|:   |...|:|.    
 Worm   351 IKRKTLNPYFNESFVFDKLPLHKMKKVSLMITVMDYDKLGSNDAIGRCLLGCNGTGAELRH---- 411

  Fly   471 FFEEVFRAKNATAQW---VPLQE 490
            :.:.:...:...|||   .|::|
 Worm   412 WMDMLASPRRPIAQWHTLGPVEE 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 48/124 (39%)
C2B_Synaptotagmin 352..488 CDD:175975 52/142 (37%)
snt-1NP_495394.3 C2A_Synaptotagmin-1-5-6-9-10 160..282 CDD:176031 47/121 (39%)
C2B_Synaptotagmin-1 293..429 CDD:176047 53/140 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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