DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and Doc2a

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_034199.1 Gene:Doc2a / 13446 MGIID:109446 Length:405 Species:Mus musculus


Alignment Length:298 Identity:91/298 - (30%)
Similarity:143/298 - (47%) Gaps:37/298 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 GNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPD--KKNFWQTRIHKRTLNPV 282
            |.|...|.||....:|:.|:|.|:.|:|..|:|.||||.|:.|||.  |.|..:|:..:.|||||
Mouse    96 GTLEFDLLYDQASCMLHCRILRAKGLKPMDFNGLADPYVKLHLLPGACKANKLKTKTQRNTLNPV 160

  Fly   283 FDEQFVFE-VTAGVIDKRTVEILLYDFDAYSRHVCIG-----------GSKLHLANLDLSEQLKL 335
            ::|:..:. :|...|..:.:.|.:.|.|..|.:..||           ..|.|. |:.|..|:.|
Mouse   161 WNEELTYSGITDDDITHKVLRISVCDEDKLSHNEFIGEIRVPLRRLKPSQKKHF-NICLERQVPL 224

  Fly   336 WTPLSSASA-----------------QDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDA 383
            .:|.|.::|                 ..:..:.|.|::||:|......|:|.:::..:|..: |.
Mouse   225 PSPSSMSAALRGISCYLKELEQAEQGPGLLEERGRILLSLSYSSRRHGLLVGIVRCAHLAAM-DV 288

  Fly   384 RNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLG 448
            ...|||||| |.|.|...|..|.||.|::.||||.:||...:::...||....||.||....:..
Mouse   289 NGYSDPYVK-TYLRPDVDKKSKHKTCVKKKTLNPEFNEEFFYEIELSTLATKTLEVTVWDYDIGK 352

  Fly   449 SSEILGRTLIGNSPEVRTE-EKIFFEEVFRAKNATAQW 485
            |::.:|...:|  |..|.| :|.:.:.:.:...|..:|
Mouse   353 SNDFIGGVSLG--PGARGEAQKHWNDCLHQPDTALERW 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 45/134 (34%)
C2B_Synaptotagmin 352..488 CDD:175975 44/135 (33%)
Doc2aNP_034199.1 Interaction with UNC13D and DYNLT1. /evidence=ECO:0000250 1..94
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 34..54
C2A_Rabphilin_Doc2 95..218 CDD:176000 41/122 (34%)
Interaction with UNC13D. /evidence=ECO:0000250 220..405 49/173 (28%)
C2B_Rabphilin_Doc2 259..391 CDD:176030 43/134 (32%)
Blue background indicates that the domain is not in the aligned region.

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