DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and Syt17

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_006507265.3 Gene:Syt17 / 110058 MGIID:104966 Length:517 Species:Mus musculus


Alignment Length:446 Identity:137/446 - (30%)
Similarity:220/446 - (49%) Gaps:67/446 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 ANEKDEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVT--S 126
            :|:||.|             :|...::||           |:|.:     |.|.....:|.|  |
Mouse   109 SNDKDGD-------------SVHTASDVP-----------LTPRT-----NSPDGRRSSSDTSKS 144

  Fly   127 TAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARS--------DKHVVLAMHPSRPR 183
            |.::.:::|:.  :|..|:||...:|.......|.....|..|        |.:    .....||
Mouse   145 TYSLTRRISSL--DSRRPSSPLIDIKPVEFGVLSAKKESIQPSVLRRTYTPDDY----FRKFEPR 203

  Fly   184 VSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQP- 247
            :.|:::.||  .:|     |.:..:.::...|    |.||.|..||.:...|.||::||::|.| 
Mouse   204 LYSLDSNLD--DVD-----SLTDEEIMSKYQL----GMLHFSTQYDLLHNHLTVRVIEARDLPPP 257

  Fly   248 ------RQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLY 306
                  ||....::||.|:.||||:||..||.:.::|..|||:|::.||:......:||:.:.:.
Mouse   258 ISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVV 322

  Fly   307 DFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVL 371
            |||.:|||..||...:.|..:||.:....|..|..:|..:  |:||::::||.|||||.||.|.:
Mouse   323 DFDKFSRHCVIGKVAVPLCEVDLVKGGHWWKALIPSSQNE--VELGELLLSLNYLPSAGRLNVDI 385

  Fly   372 IKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCV 436
            |:|:.| :..|....|||:||:.|: .|.|.:|.:||...|||::|.|||:.:|.|.:|.|:|..
Mouse   386 IRAKQL-LQTDVSQGSDPFVKIQLV-HGLKLVKTKKTSFLRGTIDPFYNESFSFKVPQEELENAS 448

  Fly   437 LEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQEPA 492
            |.|||....:..|::.:||.:||......:|...:...:...:.|..||..|:..|
Mouse   449 LVFTVFGHNMKSSNDFIGRIVIGQYSSGPSESNHWRRMLNTHRTAVEQWHSLRSRA 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 48/129 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 51/135 (38%)
Syt17XP_006507265.3 C2A_Synaptotagmin-15-17 229..357 CDD:176036 48/127 (38%)
C2B_Synaptotagmin-17 366..500 CDD:176055 51/135 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.780

Return to query results.
Submit another query.