DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and sytl3

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_021324208.1 Gene:sytl3 / 101882017 ZFINID:ZDB-GENE-040724-150 Length:581 Species:Danio rerio


Alignment Length:468 Identity:96/468 - (20%)
Similarity:180/468 - (38%) Gaps:98/468 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 TTCS--KRYRL---NWF-EQNLLESANEKDEDQ----------QREALVAGAVG-----YNVDNV 88
            |.|.  :.:::   .|| ||...:..:.|:..:          ||.:.:|....     ||..:.
Zfish   116 TVCHAYREFKIKSGEWFLEQQAKKFPSVKENSETTGDKMLQSYQRLSFIAVVPPTPPPFYNPPSF 180

  Fly    89 NEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSN-----TTEESAPPTSPT 148
            |.:...|         .|.: ||.:|..|. |.|.:...:..|..:|.     |.:......|..
Zfish   181 NRLEEHK---------KPFT-KSMENLVAS-VSAHIKKLSKSQNDLSEVAGQLTVDHGHMMYSRR 234

  Fly   149 GSLKSNTL--SYCSTTSVPI---ARSDKHVVLAMHPSRPRVSSMNAKLD-------HTKIDMTLY 201
            .||....:  :.|...|:||   |:|.....|.:  :...|||.:|..|       .|.:|..|:
Zfish   235 KSLSDGAINRALCKVPSLPILSTAQSTSTSTLCL--TDDDVSSTSAYSDDQRDSNSSTGMDSVLF 297

  Fly   202 RSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDK 266
            .        |.:|   |.|.:.|.|.|:.....|.:.:...:||..|.......||..|.|||.|
Zfish   298 E--------NTIS---VTGEIEVVLAYNNRTSCLEITIKACRNLMFRDTKKKCHPYVNVCLLPKK 351

  Fly   267 -KNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLS 330
             .||......::..|||::|.|...::|.::....:::.::......|.:.:|.:.:.||::||.
Zfish   352 CHNFKMKTAVRKGKNPVYNETFTCVLSADLLSSAVLQLSVWHSRGLKRRLFLGETLIRLADMDLE 416

  Fly   331 E---QLKLWTPLSSASAQ---DMKVDLGDIMVSL----------------AYLPSAERLMVVLIK 373
            :   |..|...|:..:.|   |.::....:::.:                ..|.:..:|.|:...
Zfish   417 DTDSQRSLCCKLNPKAPQLGGDAELQFTSVLLLIQAQFHTLPHNNTQTHGVLLGAPGQLTVLFTD 481

  Fly   374 ARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQR--GTLNPVYNEALAFDVAKETL---- 432
            ...|..|     |...:.:..|..||.:::.::.:.:::  |::...::.....::.:.||    
Zfish   482 VSKLLSV-----SKTAHFEGILCLPGHRELVRKTSALKKTDGSIRMSFSSLSQQELQQATLTLNL 541

  Fly   433 --KNCVLEFTVVH 443
              |||:|....:|
Zfish   542 WEKNCLLTSARLH 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 33/126 (26%)
C2B_Synaptotagmin 352..488 CDD:175975 17/116 (15%)
sytl3XP_021324208.1 PHD_SF 27..134 CDD:328929 4/17 (24%)
FYVE_like_SF 73..120 CDD:333710 2/3 (67%)
C2 304..429 CDD:326325 31/124 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.900

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