DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sytalpha and LOC100497338

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002938753.2 Gene:LOC100497338 / 100497338 XenbaseID:XB-GENE-29083647 Length:398 Species:Xenopus tropicalis


Alignment Length:358 Identity:79/358 - (22%)
Similarity:167/358 - (46%) Gaps:31/358 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 SLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVS--SMNAKLDHTKIDMTLYRSHSQPKTINP 212
            |:..|..:|...|.|....:...::.::.|:...::  ..::|:...:.:|........|...:.
 Frog    51 SVARNEKTYLDGTYVEKKTTSNILLKSVAPTFLEITRKEQDSKIQLMRKEMEKLEERLTPSPPST 115

  Fly   213 VSLNEV--------RGNLHVSLGYDPVGGLLNVRLLEAQNL---------QPRQFSGTADPYAKV 260
            .||:::        ||.|.:||.||.....|.:.::||.:|         :.:.||...||::.|
 Frog   116 ESLDDLDSNPPLMPRGKLKLSLYYDKKKMALLINVIEATDLPAHSHDPFVRIKVFSKADDPHSSV 180

  Fly   261 RLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLA 325
            :.:..:   |.|::.|.:.||||.|.|...:....:...:::..:.|||.||||..||.::..|.
 Frog   181 QTIIHE---WDTKVVKNSRNPVFVESFTCTLKESQLLSTSLKFEVKDFDKYSRHTLIGETRATLQ 242

  Fly   326 NLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPY 390
            .|..|:.|:|:..|.    :..|..:|::::||..||:|:::.|.::|.:...:  ...:..|.|
 Frog   243 GLKTSKTLELYEDLQ----EKTKDAIGEVLISLKCLPTAQKIEVGILKFKTSSL--STISERDVY 301

  Fly   391 VKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGR 455
            .::.:. ....|.|.:|:.::..:...|:||...|.:......:|:: ...:::.:....:::|:
 Frog   302 ARIDVF-TNQHKQKHQKSSLRAKSKVTVFNETFLFGLPDPGKTHCLI-LVSLYETIASGRKLIGQ 364

  Fly   456 TLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPL 488
            |.:||. ..:.|:..:...:...:...|:|.||
 Frog   365 TSLGNQ-NTKAEDGHWELMMQTLRQPVAKWHPL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 40/139 (29%)
C2B_Synaptotagmin 352..488 CDD:175975 25/135 (19%)
LOC100497338XP_002938753.2 C2 129..258 CDD:472691 40/135 (30%)
C2 265..396 CDD:472691 25/135 (19%)

Return to query results.
Submit another query.