DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and LOC100497338

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002938753.2 Gene:LOC100497338 / 100497338 -ID:- Length:398 Species:Xenopus tropicalis


Alignment Length:358 Identity:79/358 - (22%)
Similarity:167/358 - (46%) Gaps:31/358 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 SLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVS--SMNAKLDHTKIDMTLYRSHSQPKTINP 212
            |:..|..:|...|.|....:...::.::.|:...::  ..::|:...:.:|........|...:.
 Frog    51 SVARNEKTYLDGTYVEKKTTSNILLKSVAPTFLEITRKEQDSKIQLMRKEMEKLEERLTPSPPST 115

  Fly   213 VSLNEV--------RGNLHVSLGYDPVGGLLNVRLLEAQNL---------QPRQFSGTADPYAKV 260
            .||:::        ||.|.:||.||.....|.:.::||.:|         :.:.||...||::.|
 Frog   116 ESLDDLDSNPPLMPRGKLKLSLYYDKKKMALLINVIEATDLPAHSHDPFVRIKVFSKADDPHSSV 180

  Fly   261 RLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLA 325
            :.:..:   |.|::.|.:.||||.|.|...:....:...:::..:.|||.||||..||.::..|.
 Frog   181 QTIIHE---WDTKVVKNSRNPVFVESFTCTLKESQLLSTSLKFEVKDFDKYSRHTLIGETRATLQ 242

  Fly   326 NLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPY 390
            .|..|:.|:|:..|.    :..|..:|::::||..||:|:::.|.::|.:...:  ...:..|.|
 Frog   243 GLKTSKTLELYEDLQ----EKTKDAIGEVLISLKCLPTAQKIEVGILKFKTSSL--STISERDVY 301

  Fly   391 VKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGR 455
            .::.:. ....|.|.:|:.::..:...|:||...|.:......:|:: ...:::.:....:::|:
 Frog   302 ARIDVF-TNQHKQKHQKSSLRAKSKVTVFNETFLFGLPDPGKTHCLI-LVSLYETIASGRKLIGQ 364

  Fly   456 TLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPL 488
            |.:||. ..:.|:..:...:...:...|:|.||
 Frog   365 TSLGNQ-NTKAEDGHWELMMQTLRQPVAKWHPL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 40/139 (29%)
C2B_Synaptotagmin 352..488 CDD:175975 25/135 (19%)
LOC100497338XP_002938753.2 C2 129..258 CDD:417471 40/135 (30%)
C2 265..396 CDD:417471 25/135 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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