DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt12

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002936546.1 Gene:syt12 / 100496899 XenbaseID:XB-GENE-988426 Length:414 Species:Xenopus tropicalis


Alignment Length:451 Identity:114/451 - (25%)
Similarity:196/451 - (43%) Gaps:100/451 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QIGVYASVSFLVVSAVGAALYTTCSKRYRL----------NWFEQNLLESANEKDEDQQREALVA 78
            :||:|.:.:..::...|..|:    |.|:.          |:..:.|.:.......|.:::...|
 Frog    22 EIGIYIAGALTLLGVTGLYLW----KLYKSGNYPSPSPFPNYDYRYLKQKYGTSHSDVRKKRQPA 82

  Fly    79 GAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAP 143
            .....|:.|:|:.    |.|.|  ...|..|.::|        ..:|....:::.:|        
 Frog    83 AKPANNMANLNDT----YESIN--EFGPIELINKD--------LEMTPYGMLRKSIS-------- 125

  Fly   144 PTSPTGSLKSNTLSYCSTTSVPIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPK 208
                |.||.|                              |||:......   |:|:        
 Frog   126 ----TDSLSS------------------------------VSSIGNNFGQ---DITV-------- 145

  Fly   209 TINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADP-YAKVRLLPDKKNFWQT 272
                       |.:.|::.||.....|:|.|::.::|..|:..|..:. :..:.||||::....:
 Frog   146 -----------GQIEVTMDYDVHSNTLHVALIQGKDLLERKEDGNFESCFVHISLLPDEQIVGIS 199

  Fly   273 RIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLS-EQLKLW 336
            ||.....:.:|||.|...:....:::.:::..::..|...|.|..|.::|.|::|||: .....|
 Frog   200 RIQGNAYSVMFDETFSIPLDPLALEENSLKFSIFGIDGDDRKVSTGVAELKLSDLDLALRPFNTW 264

  Fly   337 TPLSSAS-AQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGG 400
            ..|...: |.|   .:|:|::||:|||:||||.||::|.||| :..:.:.::||:|||.|| ..|
 Frog   265 IYLQDVNKATD---TVGEILLSLSYLPTAERLTVVVVKVRNL-LWTEGKTTADPFVKVYLL-QDG 324

  Fly   401 KKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNS 461
            :||.|:||.|:|...|||:|||:.|.|....|:...|..||......|.:|.:|..:||.|
 Frog   325 RKISKKKTAVKRDDRNPVFNEAMIFSVPAIVLQELSLRITVAECCEDGRAENIGHVIIGPS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 31/124 (25%)
C2B_Synaptotagmin 352..488 CDD:175975 50/110 (45%)
syt12XP_002936546.1 C2 146..257 CDD:387358 28/110 (25%)
C2B_Synaptotagmin-12 277..412 CDD:176051 50/111 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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