DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and doc2b

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002934390.1 Gene:doc2b / 100496262 XenbaseID:XB-GENE-6032690 Length:394 Species:Xenopus tropicalis


Alignment Length:378 Identity:100/378 - (26%)
Similarity:168/378 - (44%) Gaps:66/378 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GNLSPTSLKSEDNDPAF--WVPASVTSTAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSV 164
            |.:.|.. :..|..|.|  .:||:||...:::..||.      |..||           |.|   
 Frog    24 GPIKPIK-QISDYFPRFPRGIPAAVTRANSLKSNVSQ------PSVSP-----------CET--- 67

  Fly   165 PIARSDKHVVLAMHPSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNE--VRGNLHVSLG 227
              ::.::..|..:..:....|:..||             |.:...::....::  ..|.|..||.
 Frog    68 --SKEEEEDVDKLFGAYGAASTAPAK-------------HEEEGDLDGYDSDDCTTLGTLDFSLL 117

  Fly   228 YDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLP--DKKNFWQTRIHKRTLNPVFDEQFVFE 290
            ||.....|:..:.:|:.|:|...:|.:|||.|:.|||  .|.|..:|:..:.||||.::|...: 
 Frog   118 YDQENNALHCTINKAKGLKPMDHNGLSDPYVKLHLLPGASKANKLRTKTLRNTLNPTWNETLTY- 181

  Fly   291 VTAGVID----KRTVEILLYDFDAYSRHVCIGGSKLHLANLD----------LSEQLKLWTPLSS 341
              .|:.|    ::|:.|.:.|.|.:..:..||.:::.|..|.          |.:||    |:..
 Frog   182 --YGITDEDMIRKTLRISVCDEDKFRHNEFIGETRIPLKKLKPNQTKNFSICLEKQL----PIDK 240

  Fly   342 ASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKR 406
            ...:.:: :.|.|::||.|......|:|.:|:..:|..: ||...|||||| |.|.|...|..|.
 Frog   241 TEDKSLE-ERGRILISLKYSSQKSGLLVGIIRCAHLAAM-DANGYSDPYVK-TYLKPDEDKKSKH 302

  Fly   407 KTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG 459
            ||.|::.||||.:||...:::....|....||.||....:..|::.:|..::|
 Frog   303 KTAVKKKTLNPEFNEEFCYEIKHSDLAKKTLEVTVWDYDIGKSNDFIGGVVLG 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 40/138 (29%)
C2B_Synaptotagmin 352..488 CDD:175975 39/108 (36%)
doc2bXP_002934390.1 C2A_Rabphilin_Doc2 109..232 CDD:176000 36/125 (29%)
C2B_Rabphilin_Doc2 251..383 CDD:176030 38/107 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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