DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and sytl4

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_031746962.1 Gene:sytl4 / 100495134 XenbaseID:XB-GENE-958567 Length:692 Species:Xenopus tropicalis


Alignment Length:552 Identity:134/552 - (24%)
Similarity:214/552 - (38%) Gaps:153/552 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CSKRYRL-----NWF-EQNLLESANEKDEDQQREAL-----------VAGAVGYNVDNVNE---- 90
            |||...|     :|| :|.:...||....|..|.:|           .|.|:......:||    
 Frog   110 CSKEADLKKSTGDWFYDQRVNRFANRLGRDMVRMSLRQKPSANKRETTAQALLEFSQQLNEPKTR 174

  Fly    91 ----VPRGKYSSGNAGNLSPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAPPTSPTGSL 151
                .|:.::.|..    || .|:.:.:|.......|::|       ....:::|:|.||...||
 Frog   175 KAQRSPQQQHKSSG----SP-DLRDQKSDTESTEQMSLSS-------YKTDSKKSSPSTSRRNSL 227

  Fly   152 -KSNTL-----------SYCSTTSVPIARSDKH-------------------------------- 172
             ||.||           :..:|.:||:...|:|                                
 Frog   228 EKSATLQDAKRAQGPVGANVATLTVPVRSRDRHQSDSEGEALLGSRSAGSADESDTLFKKNPRRL 292

  Fly   173 --------VVLAMHPSRPRVSSMNAKLDHTK------IDM--------------------TLYRS 203
                    .||.:.| .|.....||..|.:|      |:|                    :..||
 Frog   293 LKPADYSKSVLDLRP-EPAAPEENALGDRSKSVPRLNIEMEEEDEDIDNLVEIHRLSAGRSSLRS 356

  Fly   204 HSQPKTI-NPVSLNE---------VRGNLHVSLGYDPVGGLLNVRLLEAQNL-QPRQFSGTADPY 257
            .:...|: :.:|:..         :.|.:..|:.||....|||:.:.|.:|| ...:....::||
 Frog   357 GASSSTLGSMISIYSEAGDFGNVIITGEIIFSINYDAKVQLLNILVKECRNLAYGDELKMRSNPY 421

  Fly   258 AKVRLLPDK--KNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGS 320
            .|..|||||  :...:|.|.:.|.||:::|...:.|...::..|::|:.::.:|.:.|:..:|..
 Frog   422 IKSYLLPDKSRQGKRKTTIKRNTTNPMYNEVLKYIVPESMLHLRSLELSVWHYDRFGRNTFLGQV 486

  Fly   321 KLHLANLDLSEQLKLWTPLSSASAQDMKVDL----GDIMVSLAYLP-----SAER---------- 366
            .:.|.:.:....::...||......|.....    |:::|||.|:|     .:||          
 Frog   487 DIPLDSWNFDSLIEECLPLHGKGNMDSGAGFYNSKGELVVSLKYVPPTKPSGSERRKKKADEGGE 551

  Fly   367 LMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFD-VAKE 430
            |.|.:.:|:||..|... ..||.:||..|. |...|..||||.|.:.||||.||....:: :..|
 Frog   552 LHVWIKEAKNLTAVKTG-GISDSFVKGYLF-PHKNKNTKRKTPVVKKTLNPHYNHTFVYNGIKPE 614

  Fly   431 TLKNCVLEFTVVHDGLLGSSEILG--RTLIGN 460
            .|:|..||.||.....|.|::.||  |..|||
 Frog   615 DLQNVCLELTVWDREPLSSNDFLGGVRLGIGN 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 33/125 (26%)
C2B_Synaptotagmin 352..488 CDD:175975 47/127 (37%)
sytl4XP_031746962.1 PHD_SF 15..126 CDD:473978 6/15 (40%)
FYVE_Slp4 63..112 CDD:277303 1/1 (100%)
C2A_SLP-4_5 382..506 CDD:175995 32/123 (26%)
C2B_SLP_1-2-3-4 521..685 CDD:175987 47/128 (37%)

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