DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt5

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002938321.1 Gene:syt5 / 100493612 XenbaseID:XB-GENE-991349 Length:416 Species:Xenopus tropicalis


Alignment Length:313 Identity:113/313 - (36%)
Similarity:185/313 - (59%) Gaps:19/313 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 YRSHSQP--KTINPVSLNEVR--------GNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTAD 255
            |....||  :.::|..|::|:        |.|..||.||...|.|.|.:::|.:|......||:|
 Frog   108 YIDKVQPDVEDLDPSLLDDVKDEKPQEKLGKLQYSLDYDFQTGQLVVGIIQAADLPALDIGGTSD 172

  Fly   256 PYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGS 320
            ||.||.||||||..::|::|::||||.|:|.|.|:|....:..:|:.:.:||||.:|:|..||..
 Frog   173 PYVKVYLLPDKKKKYETKVHRKTLNPTFNESFTFKVPYAELGGKTLVMSVYDFDRFSKHDAIGEV 237

  Fly   321 KLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARN 385
            ::|:..:||:..::.|..|.||..::.: .||||..||.|:|:|.:|.|::::|:||:.: |...
 Frog   238 RVHMNTVDLAHVIEEWQDLQSAEKEEQE-KLGDICFSLRYVPTAGKLTVIVLEAKNLKKM-DVGG 300

  Fly   386 SSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSS 450
            .||||||:.|: ..||::||:||.:::.||||.|||:.:|:|..|.::...:..||:....||.:
 Frog   301 LSDPYVKIHLM-QNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVLTVLDYDKLGKN 364

  Fly   451 EILGRTLIGNSPEVRTEEKIFFEEVFRAKNATAQWVPLQ-----EPANNLATS 498
            |.:|:..:|.: ...||.:.:.:.:...:...|||..||     :.|..|.||
 Frog   365 EAIGKIFVGCN-ATGTELRHWSDMLANPRRPIAQWHTLQPEEEVDGAVGLKTS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 50/130 (38%)
C2B_Synaptotagmin 352..488 CDD:175975 49/135 (36%)
syt5XP_002938321.1 C2A_Synaptotagmin-1-5-6-9-10 135..258 CDD:176031 49/122 (40%)
C2B_Synaptotagmin-1 267..402 CDD:176047 50/137 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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