DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and LOC100493529

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002932169.1 Gene:LOC100493529 / 100493529 -ID:- Length:428 Species:Xenopus tropicalis


Alignment Length:417 Identity:129/417 - (30%)
Similarity:215/417 - (51%) Gaps:31/417 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PTSLK----SEDNDPAFWVPASVTSTA----AIQQQVSNTTEE-SAPP-----TSPTGSLKSNTL 156
            |||.:    |:||..|  |..|...:|    .|||::.|...: ..||     .:....|...|.
 Frog    20 PTSTEPPVVSQDNSTA--VAGSGDKSADTFRKIQQELMNQINKIPLPPWALIAIAVVAGLLIITC 82

  Fly   157 SYCSTTSVPIAR------SDKHVVLAMHPSRPRVS-SMNAKLDHTKIDMTLYRSHSQPKTINPVS 214
            .:|........:      ..|.:..|::....:.| ..|||.|....:..|.....:.:....  
 Frog    83 CFCICKKCCCKKKKGKKEKGKGMKNALNMKDMKGSGGQNAKDDDDDAETGLTEGEDKEEEEKE-- 145

  Fly   215 LNEVRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTL 279
             .|..|.|..||.||.....:.|.:::|..|......||:|||.||..|||||...:|::|::||
 Frog   146 -EEKLGKLQFSLDYDFQNNQMQVGIIQATELPALDMGGTSDPYVKVFFLPDKKKKHETKVHRKTL 209

  Fly   280 NPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASA 344
            ||:|:|.|.|::....:..:|:.:.:||||.:|:|..||..|:.:..:||.:.::.|..|.||..
 Frog   210 NPIFNETFTFKIPYQELGGKTLCMSIYDFDRFSKHDIIGEVKVPMNTVDLGQPIEEWRDLQSAEK 274

  Fly   345 QDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTG 409
            ::.: .||||.:||.|:|:|.:|.|.:::|:||:.: |....||||||:.|: ..||::||:||.
 Frog   275 EEPE-KLGDICISLRYVPTAGKLTVCILEAKNLKKM-DVGGLSDPYVKIHLM-QNGKRLKKKKTT 336

  Fly   410 VQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIGNSPEVRTEEKIFFEE 474
            |::.||||.:||:.:|::..|.::...:..||:....||.:|.:|:..:|.:.. .||.:.:.:.
 Frog   337 VKKKTLNPYFNESFSFEIPFEQIQKVQVVITVLDYDKLGKNEAIGKIFVGCNAS-GTELRHWSDM 400

  Fly   475 VFRAKNATAQWVPLQ-EPANNLATSAK 500
            :...:...|||.||: |...::|..:|
 Frog   401 LANPRRPIAQWHPLKPEEEVDIALGSK 427

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 45/122 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 48/135 (36%)
LOC100493529XP_002932169.1 C2A_Synaptotagmin-1-5-6-9-10 153..271 CDD:176031 43/117 (37%)
C2B_Synaptotagmin-1 280..415 CDD:176047 50/137 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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