DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and LOC100486361

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002931826.4 Gene:LOC100486361 / 100486361 -ID:- Length:959 Species:Xenopus tropicalis


Alignment Length:575 Identity:134/575 - (23%)
Similarity:221/575 - (38%) Gaps:118/575 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 ASVSFLVVSAVGAALYTTCSKRYRLNWFEQNLLESANEKDEDQQREA--------LVAGAVGYNV 85
            :|.|.:..|....:..:..||...|:  |.|.:.|.||:.....|.:        |.:.:....|
 Frog   398 SSSSMIPRSTYNKSKGSPISKNASLS--ETNGIASQNEESSGSSRSSKRSKLPVRLPSVSKETKV 460

  Fly    86 DNVNEVPRGKYSSGNAGNLSPTSLKSED-------------------------NDPAFWVPASVT 125
            | |...||.|..  |...|...|.|.|.                         :|......|||.
 Frog   461 D-VPLSPRDKLP--NVSQLETASCKEESVTPEIKPEVKGTPYSNVQILIDTVTSDEEQGATASVK 522

  Fly   126 STAAIQQQVSNTTEESAPPTSPTGSLKSNTLS--------------YCSTTSVPIARSDKHVVLA 176
            :....:..|.:.|.||....|..|::.||..|              |.||.:....::..|.:|.
 Frog   523 AAQRSEDVVEHATCESEDGKSLDGNVDSNPTSQAIGVTSARSLVNIYTSTETYNKPQTLSHQLLE 587

  Fly   177 MHPSRPRVSSMNAKLDHTKIDMTL---------YRSHSQPK------TINPVSLN---------- 216
            ...::....|..|.|..|:.|...         .::||...      :::.||.:          
 Frog   588 PERAKELSRSTPALLSETESDTASEISFQLKRHRKTHSSDSNSSDMASVSSVSNSVLSVYSGDFG 652

  Fly   217 --EVRGNLHVSLGYDPVGGLLNVRLLEAQNLQ-PRQFSGTADPYAKVRLLPDKKNFW--QTRIHK 276
              :.:|.:..||.||.......:.:.:.::|. ..:..|.:|||.|..|||||....  :|.:.:
 Frog   653 SVDAQGAVEFSLDYDEKNREFQISVSQCKDLAIVDEKKGRSDPYVKTYLLPDKARMGKRKTSVKR 717

  Fly   277 RTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSS 341
            ||.|||::|...:::...|:..:.:.:.::..|...|:..:|..::.|.:.|.|.....|.||..
 Frog   718 RTTNPVYNEVLRYKIEKMVLLIQKLNLSVWHNDPLGRNSFLGEMEIDLTSWDWSNTKSNWYPLKP 782

  Fly   342 ASAQDMK-VD-LGDIMVSLAYLP----------SAERLMVVLIKARNLRIVDDARNSS-DPYVKV 393
            .|...|. || ||.:.:|:.|:|          |.|    |.|..::.:.:...|.|. |.:||.
 Frog   783 RSVSAMNGVDHLGVMNLSIKYIPPGSLGPKHPTSGE----VHIWVKDTKDLPQLRPSGVDSFVKC 843

  Fly   394 TLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFD-VAKETLKNCVLEFTV-VHDGLLGSSEILGRT 456
            .:| |...|...:||.|.:...|||:|..:.:| ...|.|::..:|.|| .|:.|  |:..||..
 Frog   844 YVL-PDTSKKSYQKTRVIKKDSNPVFNHTIVYDGFHTEDLRDACVELTVWDHEKL--SNHFLGGI 905

  Fly   457 LIG-----------NSPEVRTEEKIFFEEVFRAKNATAQWVPLQEPANNLATSAK 500
            .:|           :..:...||..|::|:....|   :|:....|..:||...|
 Frog   906 RLGLGTGFSYGIAVDWMDSTQEEVAFWQEMMSTPN---EWIEGSLPLRSLAGKRK 957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 33/125 (26%)
C2B_Synaptotagmin 352..488 CDD:175975 41/159 (26%)
LOC100486361XP_002931826.4 PHD_SF 13..>68 CDD:419867
C2A_SLP-1_2 657..781 CDD:176039 32/123 (26%)
C2B_SLP_1-2-3-4 795..950 CDD:175987 42/164 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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