DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt17

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001096478.1 Gene:syt17 / 100125097 XenbaseID:XB-GENE-949409 Length:474 Species:Xenopus tropicalis


Alignment Length:470 Identity:145/470 - (30%)
Similarity:230/470 - (48%) Gaps:63/470 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 CSKRYRLNWFEQNLLESANEKDEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNLSPTSLKS 111
            |.|.|..:..:       :.:||.:......|....:.|.|.:|...|  .|.|..:..|.:  .
 Frog    31 CQKCYECSCCQ-------SSEDEVEILGPFPAQTPPWLVSNRSEDKEG--DSDNTTSEPPAT--P 84

  Fly   112 EDNDPAFWVPASVT--STAAIQQQVSNTTEESAPPTSPTGSLKSNTLSYCSTTSVPI----ARSD 170
            :|..|.....:|.|  ||.::.:::|:.  ||..|:||...:|            ||    ..:.
 Frog    85 QDTSPDRRRSSSDTSRSTYSLTRRISSL--ESRRPSSPLIDIK------------PIEFGALGAK 135

  Fly   171 KHVVLAMHPSRPRV--SSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEV-----RGNLHVSLGY 228
            |.:|      :|.|  .|...:....|.:..||...|....::.::.:|:     .|.||.|..|
 Frog   136 KEIV------QPTVLRKSYTPEDYFRKFEPRLYSLDSSNDDVDSLTDDEILTKYQLGMLHFSTQY 194

  Fly   229 DPVGGLLNVRLLEAQNLQP-------RQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQ 286
            |.:...||||::||::|.|       ||....::||.|:.||||:||..||.:.::|.||||:|:
 Frog   195 DLLHNYLNVRVIEARDLPPPISYDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQNPVFEER 259

  Fly   287 FVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDL 351
            :.||:......:||:.:.:.|||.:|||..||...:.|..:||.:....|..:..:|..:  |:|
 Frog   260 YTFEIQFLEAQRRTLLLTIVDFDKFSRHCVIGKVAMPLNEVDLVKGGHWWKAIIPSSQNE--VEL 322

  Fly   352 GDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLN 416
            |::::||.|||||.||.|.:|:|:.| :..|....|||:||:.|: .|.|..|.:||...|||::
 Frog   323 GELLLSLNYLPSAGRLNVDIIRAKQL-LQTDMSQGSDPFVKIQLV-HGLKLAKTKKTSCMRGTID 385

  Fly   417 PVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG----NSPEVRTEEKIFFEEVFR 477
            |.|||:.:|.|.:|.|:|..|.|||....:..|::.:||.:||    .|||.....::....   
 Frog   386 PFYNESFSFKVPQEELENVSLVFTVYGHNMKTSNDFIGRIVIGQYASGSPESNHWRRMLNSN--- 447

  Fly   478 AKNATAQWVPLQEPA 492
             :.|..||..|:..|
 Frog   448 -RTAVEQWHSLRSRA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 49/134 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 53/139 (38%)
syt17NP_001096478.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 54..112 15/61 (25%)
C2A_Synaptotagmin-15-17 186..314 CDD:176036 49/127 (39%)
C2B_Synaptotagmin-17 323..457 CDD:176055 53/139 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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