DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt8

DIOPT Version :10

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_012815834.1 Gene:syt8 / 100037878 XenbaseID:XB-GENE-978920 Length:396 Species:Xenopus tropicalis


Alignment Length:316 Identity:103/316 - (32%)
Similarity:170/316 - (53%) Gaps:17/316 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 SSMNAKLDHTKIDMTLYRSHSQPKTINPVSLN-------EVRGNLHVSLGYDPVGGLLNVRLLEA 242
            |..|.|....||||.....:.....:.|.:.|       |.||.:..||.|:.....|.|.:.:|
 Frog    65 SKKNKKKKDKKIDMDKVPGNLTTHLVQPGAGNLQKGEKVEYRGRVQYSLEYNFQTEELTVGVKQA 129

  Fly   243 QNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYD 307
            ..|:.....||:||||.|.:..|.:..::|:::::||||||:|.|||:||...:.:.|..:.::|
 Frog   130 AALKAMDLGGTSDPYAIVYVTNDTRKKFETKVNRKTLNPVFNESFVFKVTQEEVPRTTAVVQIFD 194

  Fly   308 FDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLI 372
            |:.:.:|..||...:.|..::|...::.|..|..|...:.: .||||..||.|:||:.:|.::::
 Frog   195 FNRFLKHDVIGEMVIPLGEVNLQHVIEDWKDLGPAGKTEHE-HLGDICFSLRYVPSSGKLTIIIL 258

  Fly   373 KARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVL 437
            :|:||:.: |:...|||||||. |....||.|::||.|::.||.|.:||:..|||:.|.:||..|
 Frog   259 EAKNLKRM-DSDGFSDPYVKVH-LALNRKKWKRKKTAVKKSTLKPYFNESFTFDVSLEQMKNLDL 321

  Fly   438 EFTVVHDGLLGSSEILGRTLIG---NSPEVRTEEKIFFEEVFRAKNATAQWVPLQE 490
            ..:|.....:|.:|.:|:..:|   :...:|.    :.:.:...:...|||..|||
 Frog   322 IISVWDHDKVGKNEQIGKLFLGCRASGNALRH----WSDMLAHPRRPIAQWHKLQE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 40/122 (33%)
C2B_Synaptotagmin 352..488 CDD:175975 48/138 (35%)
syt8XP_012815834.1 C2A_Synaptotagmin-1-5-6-9-10 105..228 CDD:176031 40/122 (33%)
C2B_Synaptotagmin-1 237..372 CDD:176047 49/140 (35%)

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