DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt8

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_012815834.1 Gene:syt8 / 100037878 XenbaseID:XB-GENE-978920 Length:396 Species:Xenopus tropicalis


Alignment Length:316 Identity:103/316 - (32%)
Similarity:170/316 - (53%) Gaps:17/316 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 SSMNAKLDHTKIDMTLYRSHSQPKTINPVSLN-------EVRGNLHVSLGYDPVGGLLNVRLLEA 242
            |..|.|....||||.....:.....:.|.:.|       |.||.:..||.|:.....|.|.:.:|
 Frog    65 SKKNKKKKDKKIDMDKVPGNLTTHLVQPGAGNLQKGEKVEYRGRVQYSLEYNFQTEELTVGVKQA 129

  Fly   243 QNLQPRQFSGTADPYAKVRLLPDKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYD 307
            ..|:.....||:||||.|.:..|.:..::|:::::||||||:|.|||:||...:.:.|..:.::|
 Frog   130 AALKAMDLGGTSDPYAIVYVTNDTRKKFETKVNRKTLNPVFNESFVFKVTQEEVPRTTAVVQIFD 194

  Fly   308 FDAYSRHVCIGGSKLHLANLDLSEQLKLWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLI 372
            |:.:.:|..||...:.|..::|...::.|..|..|...:.: .||||..||.|:||:.:|.::::
 Frog   195 FNRFLKHDVIGEMVIPLGEVNLQHVIEDWKDLGPAGKTEHE-HLGDICFSLRYVPSSGKLTIIIL 258

  Fly   373 KARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVL 437
            :|:||:.: |:...|||||||. |....||.|::||.|::.||.|.:||:..|||:.|.:||..|
 Frog   259 EAKNLKRM-DSDGFSDPYVKVH-LALNRKKWKRKKTAVKKSTLKPYFNESFTFDVSLEQMKNLDL 321

  Fly   438 EFTVVHDGLLGSSEILGRTLIG---NSPEVRTEEKIFFEEVFRAKNATAQWVPLQE 490
            ..:|.....:|.:|.:|:..:|   :...:|.    :.:.:...:...|||..|||
 Frog   322 IISVWDHDKVGKNEQIGKLFLGCRASGNALRH----WSDMLAHPRRPIAQWHKLQE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 40/122 (33%)
C2B_Synaptotagmin 352..488 CDD:175975 48/138 (35%)
syt8XP_012815834.1 C2A_Synaptotagmin-1-5-6-9-10 105..228 CDD:176031 40/122 (33%)
C2B_Synaptotagmin-1 237..372 CDD:176047 49/140 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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