DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and doc2b

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_017211854.1 Gene:doc2b / 100006713 ZFINID:ZDB-GENE-090615-1 Length:648 Species:Danio rerio


Alignment Length:496 Identity:125/496 - (25%)
Similarity:208/496 - (41%) Gaps:107/496 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LSAGEMDIVIREEDISL--AQIGVYASVSFLVVSAVGAALYTTCSKRYRLNWFEQNLLESANEK- 67
            :..||...|.|...||.  ||..||.|.|                     :..:..|.|.:::: 
Zfish   179 IERGEQLPVARSAPISYTWAQSRVYLSES---------------------DGSDAELSECSSDRK 222

  Fly    68 ----DEDQQREALVAGAVGYNVDNVNEVPRGKYSSGNAGNL---SPTSLKSEDNDPAFWVPASVT 125
                :.:|:|::..:|       ...:.|:..::|...||:   ||:||.||.:..:.:.|    
Zfish   223 TFASETNQRRDSESSG-------GQVQTPQSSFTSPTRGNVHIESPSSLVSEQSSSSSFNP---- 276

  Fly   126 STAAIQQQV--SNTTEESAPPTSPTGSLKSNTLSYCSTTSVPIARSDKH----------VVLAMH 178
               .::.:|  .:.|..:.|..|..|||:|::.|..|......|..|:.          :|.:..
Zfish   277 ---GLEDEVIDHSRTLLTPPALSRAGSLRSSSTSQKSEGPQADANRDEDDLDQAFGATALVASKK 338

  Fly   179 PSRPRVSSMNAKLDHTKIDMTLYRSHSQPKTINPVSLNEVRGNLHVSLGYDPVGGLLNVRLLEA- 242
            ...|.|...::. |.|.:                       |.|..||.||.....|:..:.:| 
Zfish   339 EEEPDVEGYDSD-DSTTL-----------------------GTLDFSLLYDQENNALHCTINKAK 379

  Fly   243 -------QNLQPRQFSGTADPYAKVRLLP--DKKNFWQTRIHKRTLNPVFDEQFVFEVTAGVID- 297
                   :.|:|...:|.:|||.|:.|||  .|.|..:|:..:.|||||:.|...:   .|:.| 
Zfish   380 LPVPRYKKGLKPMDHNGLSDPYVKLHLLPGASKANKLRTKTLRNTLNPVWSETLTY---YGITDE 441

  Fly   298 ---KRTVEILLYDFDAYSRHVCIGGSKLHLANL------DLSEQLKLWTPLSSASAQDMKVDLGD 353
               ::|:.|.:.|.|.:..:..||.:::.|..|      :.|..|:...|:.....:.:: :.|.
Zfish   442 DMVRKTLRISVCDEDKFRHNEFIGETRIPLKKLKPNQTKNFSNCLEKQLPIDKTDDKSLE-ERGR 505

  Fly   354 IMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPGGKKIKKRKTGVQRGTLNPV 418
            ||:||.|......|:|.:|:..:|..: ||...|||||| |.|.|...|..|.||.|::.||||.
Zfish   506 IMISLKYSSQKSGLVVGIIRCAHLAAM-DANGFSDPYVK-TYLKPDENKKSKHKTAVKKKTLNPE 568

  Fly   419 YNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG 459
            :||...:::....|....||.||....:..|::.:|...:|
Zfish   569 FNEEFFYEIKYADLSKKTLEVTVWDYDIGKSNDFIGGVSLG 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 40/142 (28%)
C2B_Synaptotagmin 352..488 CDD:175975 40/108 (37%)
doc2bXP_017211854.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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