DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt19

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_001343313.4 Gene:syt19 / 100003865 ZFINID:ZDB-GENE-090602-3 Length:384 Species:Danio rerio


Alignment Length:287 Identity:78/287 - (27%)
Similarity:145/287 - (50%) Gaps:33/287 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 VRGNLHVSLGYDPVGGLLNVRLLEAQNLQPRQFSGTADPYAKVRLL----PDK-KNF-------W 270
            ::|:|..||.||.:...:.|.:|:||:|..|.||.:.||:..|||:    .|| ||.       |
Zfish   107 IQGSLRFSLFYDQLQSKMVVTVLDAQDLAVRDFSHSVDPFVWVRLMWAEREDKEKNSMRCLLHEW 171

  Fly   271 QTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLKL 335
            ||||.|.:..|||.:||...:....:.:.||...:.|||.||||..:|.::..|..|.:|..|:|
Zfish   172 QTRIVKNSCCPVFGDQFSCILAEDEVSRVTVRFEVRDFDKYSRHGVLGETRASLNTLKISYPLEL 236

  Fly   336 WTPLSSASAQDMKVD----LGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLL 396
                    .||::|.    :|:.::||.|:|:::||.|.::|...:...:....:.  |.: |::
Zfish   237 --------RQDLQVPRKDIVGEALLSLKYMPTSQRLEVGVLKIHTVCYHNKTERAL--YAR-TIV 290

  Fly   397 GPGGKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTV--VHDGLLGSSEILGRTLIG 459
            .....:::.::|..::.....|:||.:.|.:..:.:|.|.:|.:|  :......|..::|...:.
Zfish   291 TCNQSRLRHQRTTQKKRREVTVFNEVMTFVLPDQQIKECSIEVSVYEIQPSKKSSKNLIGHIQVK 355

  Fly   460 NSPEVRTEEKIFFEEVFRA-KNATAQW 485
            .:   :|.|...::::.:: :...|.|
Zfish   356 KN---KTGENEHWKQMMQSLRQPVANW 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 49/134 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 26/137 (19%)
syt19XP_001343313.4 C2 109..241 CDD:301316 51/139 (37%)
C2 249..382 CDD:301316 26/137 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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