DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sytalpha and syt17

DIOPT Version :9

Sequence 1:NP_001188832.1 Gene:Sytalpha / 35068 FlyBaseID:FBgn0261089 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_001922508.4 Gene:syt17 / 100000374 ZFINID:ZDB-GENE-090527-1 Length:474 Species:Danio rerio


Alignment Length:421 Identity:135/421 - (32%)
Similarity:205/421 - (48%) Gaps:49/421 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SPTSLKSEDNDPAFWVPASVTSTAAIQQQVSNTTEESAPPTSP--------TGSLKSNTLSYCST 161
            :|:.|.::.||........|....|...| |:.|....||||.        .|.|.|......|:
Zfish    57 TPSWLVNDYNDEKGTNSHLVDQDGASSPQ-SDPTINCRPPTSEAARSTFSLAGQLASLNARRPSS 120

  Fly   162 TSVPIARSD-------KHVV--LAMHPSRPRVSSMNAKLDH-TKIDMTLYRSHSQPKTINPVSLN 216
            ..|.:...:       |.||  |...|:.|.        |: .|::..||...|....::.::..
Zfish   121 PMVDVKPIEFWAMGPRKEVVQPLRKPPTPPD--------DYFRKLEPHLYSLDSCSDDVDSLTDE 177

  Fly   217 EV-----RGNLHVSLGYDPVGGLLNVRLLEAQNLQP-------RQFSGTADPYAKVRLLPDKKNF 269
            |:     .|.||.|..||.:...|.||::||::|.|       ||....::||.|:.||||.||.
Zfish   178 EILMRYQLGMLHFSTQYDLINAHLIVRVIEARDLPPPVTCDGARQDMAHSNPYVKMSLLPDNKNS 242

  Fly   270 WQTRIHKRTLNPVFDEQFVFEVTAGVIDKRTVEILLYDFDAYSRHVCIGGSKLHLANLDLSEQLK 334
            .||.:.::|.||||:|:|.|::......:||:.:.:.|||.:|||..||...|.|:.:||.:...
Zfish   243 RQTGVKRKTQNPVFEERFTFDLPFLEAQRRTLLLSVVDFDKFSRHCVIGKVALPLSEVDLVKGGH 307

  Fly   335 LWTPLSSASAQDMKVDLGDIMVSLAYLPSAERLMVVLIKARNLRIVDDARNSSDPYVKVTLLGPG 399
            .|..|..:|..:  |:||::::||.|||||.||.|.:|:|:.| :..|....|||:|||.|: .|
Zfish   308 WWKALVPSSQNE--VELGELLLSLNYLPSAGRLNVDIIRAKQL-LQTDMCQGSDPFVKVQLV-TG 368

  Fly   400 GKKIKKRKTGVQRGTLNPVYNEALAFDVAKETLKNCVLEFTVVHDGLLGSSEILGRTLIG---NS 461
            .|.:|.:||...|||::|.|||:.:|.|.:|.|....|..||....:..|::.:||.:||   :.
Zfish   369 LKLMKSKKTSCMRGTIDPCYNESFSFRVPQEDLCEVSLVLTVYGHNVKSSNDFVGRIVIGQFSSG 433

  Fly   462 PEVRTEEKIFFEEVFRAKNATAQWVPLQEPA 492
            |:..|..:.....   .:....||..|:..|
Zfish   434 PQETTHWRRLLSS---QRTPVEQWHSLRSRA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SytalphaNP_001188832.1 C2A_Synaptotagmin-8 218..341 CDD:176033 50/134 (37%)
C2B_Synaptotagmin 352..488 CDD:175975 50/138 (36%)
syt17XP_001922508.4 C2A_Synaptotagmin-15-17 186..314 CDD:176036 50/127 (39%)
C2B_Synaptotagmin-17 323..457 CDD:176055 50/138 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.780

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