DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6870 and fat-3

DIOPT Version :9

Sequence 1:NP_001286018.1 Gene:CG6870 / 35067 FlyBaseID:FBgn0032652 Length:137 Species:Drosophila melanogaster
Sequence 2:NP_001255426.1 Gene:fat-3 / 177820 WormBaseID:WBGene00001395 Length:443 Species:Caenorhabditis elegans


Alignment Length:71 Identity:19/71 - (26%)
Similarity:33/71 - (46%) Gaps:17/71 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 DDCWVVIYDRVYDVTHFLRDHPGGDDVIMDHAGRDATIAFH----GTGHSGDAIEMMK------D 110
            |..|:.:.:.:      ::.|||| .||..:...|||..||    |:..:...::::|      :
 Worm    15 DGKWLYLSEEL------VKKHPGG-AVIEQYRNSDATHIFHAFHEGSSQAYKQLDLLKKHGEHDE 72

  Fly   111 FLIGQL 116
            ||..||
 Worm    73 FLEKQL 78

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6870NP_001286018.1 Cyt-b5 46..116 CDD:395121 17/69 (25%)
fat-3NP_001255426.1 Prefoldin <52..113 CDD:298833 6/27 (22%)
FA_desaturase 148..415 CDD:278890
Delta6-FADS-like 150..413 CDD:239583
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3843
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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