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Protein Alignment Oli and Twist1
DIOPT Version :9
Sequence 1: | NP_001188830.1 |
Gene: | Oli / 35066 |
FlyBaseID: | FBgn0032651 |
Length: | 232 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445982.1 |
Gene: | Twist1 / 85489 |
RGDID: | 621455 |
Length: | 203 |
Species: | Rattus norvegicus |
Alignment Length: | 193 |
Identity: | 59/193 - (30%) |
Similarity: | 80/193 - (41%) |
Gaps: | 38/193 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 PIPPTANMLGGQHPAPTASPPQS--------VPGRRTPLGSVGLGGFYAQGMGMSQQPPTDENKP 76
|:.|..:.|......|....|.| ...||:..||.|.||....|:| ..::|
Rat 9 PVSPADDSLSNSEEEPDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGIG-------GGDEP 66
Fly 77 GPSAPEKPLSPTAAAIAAIAISGGTTTVAVSSGGASGSGSNSG---KQKNRQGKTVRLNINARER 138
|..|..|....:|.. .|| :.||..|.||:|| .|...:.:|.|:..|.|||
Rat 67 GSPAQGKRGKKSAGG------GGG------AGGGGGGGGSSSGGGSPQSYEELQTQRVMANVRER 119
Fly 139 RRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYI-----LMQQNALEELRRLLAYI 196
:|...||:|...||.:||...|. |||||.||.||..|| ::|.:.|:......:|:
Rat 120 QRTQSLNEAFAALRKIIPTLPSD---KLSKIQTLKLAARYIDFLYQVLQSDELDSKMASCSYV 179
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Oli | NP_001188830.1 |
HLH |
134..188 |
CDD:197674 |
26/58 (45%) |
Twist1 | NP_445982.1 |
HLH |
110..160 |
CDD:278439 |
25/52 (48%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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