DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oli and Olig1

DIOPT Version :9

Sequence 1:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_058664.2 Gene:Olig1 / 50914 MGIID:1355334 Length:260 Species:Mus musculus


Alignment Length:204 Identity:76/204 - (37%)
Similarity:99/204 - (48%) Gaps:45/204 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ANMLGGQHPAPTASPPQSVPGRRTPLGSVGLGGFYAQGMGMSQQPPTDENKPGPSAPEKPLSPTA 89
            |.||..|.|                 |.|.||....:.:|. :|||.       |:.....|.||
Mouse    15 ATMLRPQRP-----------------GDVQLGASLYELVGY-RQPPI-------SSSSSSSSSTA 54

  Fly    90 AAIAAIAISGGTTTVAVSSGGASGS-GSNSGKQKNRQGKTVRLNINARERRRMHDLNDALDELRS 153
            :.:...|.......:|...|.|..| |:.:..::.:|.:.:|..||:|||:||.|||.|:|.||.
Mouse    55 SLLPKPAREKAEAPLAEPRGPAPESGGARADAKEEQQQQQLRRKINSRERKRMQDLNLAMDALRE 119

  Fly   154 VI-PY--AHSPSV--RKLSKIATLLLAKNYILMQQNALEELRRLLAYIQSTTGAAPLDLGAFPAA 213
            || ||  ||....  ||||||||||||:||||:..::|:||||.|..            ||.|||
Mouse   120 VILPYSAAHCQGAPGRKLSKIATLLLARNYILLLGSSLQELRRALGD------------GAGPAA 172

  Fly   214 AKLQALLQG 222
            .:|  ||.|
Mouse   173 PRL--LLAG 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_001188830.1 HLH 134..188 CDD:197674 36/58 (62%)
Olig1NP_058664.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..104 16/68 (24%)
HLH 96..153 CDD:278439 37/56 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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