DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oli and atoh1b

DIOPT Version :9

Sequence 1:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001122151.1 Gene:atoh1b / 493915 ZFINID:ZDB-GENE-041201-1 Length:206 Species:Danio rerio


Alignment Length:186 Identity:58/186 - (31%)
Similarity:80/186 - (43%) Gaps:49/186 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 QHPAPTASPPQSVPGRRTPLGSVGLGGFYAQGMGMSQQPPTDENKPGPSAPEKPL-----SPTAA 90
            :||..|.|.|::......|..|..:.. ||:                 :|.:.|:     ||.||
Zfish    23 EHPRLTRSDPRAWMTSAAPEYSSAVEN-YAR-----------------TAADSPMEKYISSPQAA 69

  Fly    91 AIAAIAISGGTTTVAVSSGGASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDALDELRSVI 155
            :         ....|.|........|.||.|::|     |:..|||||||||.||.|.|:|||||
Zfish    70 S---------EDHHAGSKARPGSKASVSGPQRHR-----RVAANARERRRMHGLNRAFDKLRSVI 120

  Fly   156 PYAHSPSVRKLSKIATLLLAKNYI---------LMQQNALEELRRLLAY-IQSTTG 201
            |...:.  :||||..||.:|:.||         ::|..|....|..:.| |.:|:|
Zfish   121 PSLENE--KKLSKYDTLQMAQIYITELSELLEGVVQSGAPGSQRTAIPYAIDATSG 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_001188830.1 HLH 134..188 CDD:197674 30/62 (48%)
atoh1bNP_001122151.1 HLH 92..150 CDD:238036 30/64 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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