DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oli and olig3

DIOPT Version :10

Sequence 1:NP_523592.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001008191.1 Gene:olig3 / 493553 XenbaseID:XB-GENE-919789 Length:263 Species:Xenopus tropicalis


Alignment Length:96 Identity:56/96 - (58%)
Similarity:71/96 - (73%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 VSSGGASGSGSNS----GKQKNRQG-KTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRK 165
            :|..|:.|.|.:|    .||.:.|. :.:||.||.|||:||||||.|:|.||.|:||||.|||||
 Frog    51 LSKHGSRGEGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGLREVMPYAHGPSVRK 115

  Fly   166 LSKIATLLLAKNYILMQQNALEELRRLLAYI 196
            ||||||||||:|||||..::|||::||:..|
 Frog   116 LSKIATLLLARNYILMLTSSLEEMKRLVGEI 146

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_523592.1 bHLH_TS_bHLHe22_bHLHb5 129..198 CDD:381524 48/68 (71%)
olig3NP_001008191.1 bHLH_SF 64..144 CDD:469605 50/79 (63%)

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