DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oli and Atoh7

DIOPT Version :9

Sequence 1:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001163953.1 Gene:Atoh7 / 365564 RGDID:1304957 Length:149 Species:Rattus norvegicus


Alignment Length:109 Identity:42/109 - (38%)
Similarity:50/109 - (45%) Gaps:12/109 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 KPLSPTAAAIAAIAISGGTTTVAVSSGGASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDA 147
            ||..|.|.|..|...:|.... |||..|.....|.:.:         ||..||||||||..||.|
  Rat     6 KPHGPPAGARGAPPCAGAAER-AVSCAGPGRLESAARR---------RLAANARERRRMQGLNTA 60

  Fly   148 LDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRR 191
            .|.||.|:|.....  :||||..||.:|.:||:.....|.|..|
  Rat    61 FDRLRRVVPQWGQD--KKLSKYETLQMALSYIVALTRILAEAER 102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_001188830.1 HLH 134..188 CDD:197674 26/53 (49%)
Atoh7NP_001163953.1 HLH 54..99 CDD:197674 19/46 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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