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Protein Alignment Oli and olig2
DIOPT Version :9
Sequence 1: | NP_001188830.1 |
Gene: | Oli / 35066 |
FlyBaseID: | FBgn0032651 |
Length: | 232 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_835201.1 |
Gene: | olig2 / 325288 |
ZFINID: | ZDB-GENE-030131-4013 |
Length: | 273 |
Species: | Danio rerio |
Alignment Length: | 188 |
Identity: | 72/188 - (38%) |
Similarity: | 98/188 - (52%) |
Gaps: | 45/188 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 78 PSAPEKPLSPTAAAIAAIAISGGTTTVAVSS----GGASGSGSNSGKQ----------KNR---- 124
||:||......:|...::..||..::....| .||...|.:|.:: |:|
Zfish 12 PSSPEGDDLFLSAVKKSVGFSGAVSSTQSDSPPELRGADMRGISSAEEDSMALKMLSKKDRKLLS 76
Fly 125 --QGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALE 187
:.:::||.||:|||:||||||.|:|.||.|:||||.|||||||||||||||:|||||..|:||
Zfish 77 ENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSNSLE 141
Fly 188 ELRRLLAYIQ-----------------STTGAAPLDLGAFPAAAKLQALLQGPHNEPP 228
|::||::.|. :.|.||...|...|||.. |:..|
Zfish 142 EMKRLVSEIYGGGSGAHHAGFHPSSCGTLTHAAAAPLPGHPAAVS--------HSSHP 191
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Oli | NP_001188830.1 |
HLH |
134..188 |
CDD:197674 |
41/53 (77%) |
olig2 | NP_835201.1 |
HLH |
88..142 |
CDD:197674 |
41/53 (77%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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