DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oli and olig2

DIOPT Version :10

Sequence 1:NP_523592.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_835201.1 Gene:olig2 / 325288 ZFINID:ZDB-GENE-030131-4013 Length:273 Species:Danio rerio


Alignment Length:188 Identity:72/188 - (38%)
Similarity:98/188 - (52%) Gaps:45/188 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 PSAPEKPLSPTAAAIAAIAISGGTTTVAVSS----GGASGSGSNSGKQ----------KNR---- 124
            ||:||......:|...::..||..::....|    .||...|.:|.::          |:|    
Zfish    12 PSSPEGDDLFLSAVKKSVGFSGAVSSTQSDSPPELRGADMRGISSAEEDSMALKMLSKKDRKLLS 76

  Fly   125 --QGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALE 187
              :.:::||.||:|||:||||||.|:|.||.|:||||.|||||||||||||||:|||||..|:||
Zfish    77 ENELQSMRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLSNSLE 141

  Fly   188 ELRRLLAYIQ-----------------STTGAAPLDLGAFPAAAKLQALLQGPHNEPP 228
            |::||::.|.                 :.|.||...|...|||..        |:..|
Zfish   142 EMKRLVSEIYGGGSGAHHAGFHPSSCGTLTHAAAAPLPGHPAAVS--------HSSHP 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_523592.1 bHLH_TS_bHLHe22_bHLHb5 129..198 CDD:381524 49/85 (58%)
olig2NP_835201.1 bHLH_TS_OLIG2 69..151 CDD:381510 50/81 (62%)

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