DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oli and Tcf21

DIOPT Version :10

Sequence 1:NP_523592.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001027569.1 Gene:Tcf21 / 252856 RGDID:620523 Length:179 Species:Rattus norvegicus


Alignment Length:114 Identity:37/114 - (32%)
Similarity:55/114 - (48%) Gaps:28/114 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 GTTTVAVSSGGASGSGS------NSGKQK------------NRQGKTVRLN-INARERRRMHDLN 145
            ||:..:...|....:||      ..||::            :::||.|:.| .|||||.||..|:
  Rat    32 GTSNESTEEGSNCENGSPQKGRGGLGKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLS 96

  Fly   146 DALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEELRRLLA 194
            .|...|::.:|:.  |...||||:.||.||.:||       ..||::||
  Rat    97 KAFSRLKTTLPWV--PPDTKLSKLDTLRLASSYI-------AHLRQILA 136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_523592.1 bHLH_TS_bHLHe22_bHLHb5 129..198 CDD:381524 28/67 (42%)
Tcf21NP_001027569.1 bHLH_TS_TCF21_capsulin 77..140 CDD:381547 29/69 (42%)

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