DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oli and Twist1

DIOPT Version :10

Sequence 1:NP_523592.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_035788.1 Gene:Twist1 / 22160 MGIID:98872 Length:206 Species:Mus musculus


Alignment Length:194 Identity:57/194 - (29%)
Similarity:79/194 - (40%) Gaps:37/194 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PIPPTANMLGGQHPAPTASPPQS--------VPGRRTPLGSVGLGGFYAQGMGMSQQPPTD-ENK 75
            |:.|..:.|......|....|.|        ...||:..||.|.||....|:|...:|.:. :.|
Mouse     9 PVSPADDSLSNSEEEPDRQQPASGKRGARKRRSSRRSAGGSAGPGGATGGGIGGGDEPGSPAQGK 73

  Fly    76 PGPSAPEKPLSPTAAAIAAIAISGGTTTVAVSSGGASGSGSNSG---KQKNRQGKTVRLNINARE 137
            .|..:                 :||........||..|.||:||   .|...:.:|.|:..|.||
Mouse    74 RGKKS-----------------AGGGGGGGAGGGGGGGGGSSSGGGSPQSYEELQTQRVMANVRE 121

  Fly   138 RRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYI-----LMQQNALEELRRLLAYI 196
            |:|...||:|...||.:||...|.   |||||.||.||..||     ::|.:.|:......:|:
Mouse   122 RQRTQSLNEAFAALRKIIPTLPSD---KLSKIQTLKLAARYIDFLYQVLQSDELDSKMASCSYV 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_523592.1 bHLH_TS_bHLHe22_bHLHb5 129..198 CDD:381524 28/73 (38%)
Twist1NP_035788.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..109 28/116 (24%)
bHLH_TS_TWIST1 102..178 CDD:381418 29/78 (37%)
Sufficient for transactivation activity 165..195 3/18 (17%)

Return to query results.
Submit another query.