DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oli and ngn-1

DIOPT Version :9

Sequence 1:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_500236.1 Gene:ngn-1 / 177045 WormBaseID:WBGene00003595 Length:184 Species:Caenorhabditis elegans


Alignment Length:122 Identity:40/122 - (32%)
Similarity:56/122 - (45%) Gaps:29/122 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 QGKTVRLN-INARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIATLLLAKNYILMQQNALEE 188
            :.||||.: .||||||||:.|||||:.||.::|..  |...|::||.||..|:.||......|  
 Worm    58 RAKTVRRDKANARERRRMNSLNDALEHLRGILPAL--PDEPKMTKIETLRKAQEYIASLSFQL-- 118

  Fly   189 LRRLLAYIQSTTGAAP-----LDLGAFPAAAKLQALLQGPHNEP--------PTSSS 232
                       :|.:|     .:.|:....:..|:|...|...|        |:|.|
 Worm   119 -----------SGGSPDSSQCCETGSCGLCSASQSLQSTPFQSPCFPQPLQYPSSYS 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_001188830.1 HLH 134..188 CDD:197674 26/53 (49%)
ngn-1NP_500236.1 bHLH_SF 63..119 CDD:381792 27/70 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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