DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oli and neurod2

DIOPT Version :9

Sequence 1:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_571157.1 Gene:neurod2 / 114435 ZFINID:ZDB-GENE-010608-3 Length:363 Species:Danio rerio


Alignment Length:106 Identity:45/106 - (42%)
Similarity:56/106 - (52%) Gaps:24/106 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 GASGSGSNSGKQ--KNR--------QGKTVRLNINARERRRMHDLNDALDELRSVIP-YAHSPSV 163
            |..|.|....|:  |.|        :.|..|...|||||.||||||.|||.|..|:| |:   ..
Zfish    79 GEEGDGDRPKKRGPKKRKMTPARLERSKVRRQKANARERTRMHDLNSALDNLLKVVPCYS---KT 140

  Fly   164 RKLSKIATLLLAKNYILMQQNALEELRR------LLAYIQS 198
            :|||||.||.||||||.    ||.|:.|      :::|:|:
Zfish   141 QKLSKIETLRLAKNYIW----ALSEILRNGKRPDVVSYVQT 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_001188830.1 HLH 134..188 CDD:197674 33/54 (61%)
neurod2NP_571157.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..116 10/36 (28%)
Nuclear localization signal. /evidence=ECO:0000255 93..99 2/5 (40%)
HLH 105..164 CDD:238036 36/65 (55%)
Neuro_bHLH 166..285 CDD:289310 2/12 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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