DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oli and neurod6b

DIOPT Version :9

Sequence 1:NP_001188830.1 Gene:Oli / 35066 FlyBaseID:FBgn0032651 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001296772.1 Gene:neurod6b / 114415 ZFINID:ZDB-GENE-010608-2 Length:332 Species:Danio rerio


Alignment Length:87 Identity:40/87 - (45%)
Similarity:54/87 - (62%) Gaps:11/87 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 KQKNRQGKTVRLNI-----NARERRRMHDLNDALDELRSVIP-YAHSPSVRKLSKIATLLLAKNY 178
            ::|..:|:..|:.:     |||||.|||.|||||:.||.|:| |:   ..:|||||.||.|||||
Zfish    80 RKKKSEGRGDRVKMRRQEANARERSRMHGLNDALESLRKVVPCYS---KTQKLSKIETLRLAKNY 141

  Fly   179 ILMQQNALEELRR--LLAYIQS 198
            |......|...:|  |||::|:
Zfish   142 IWALSETLSAGKRPDLLAFVQT 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OliNP_001188830.1 HLH 134..188 CDD:197674 32/54 (59%)
neurod6bNP_001296772.1 HLH 92..150 CDD:238036 31/60 (52%)
Neuro_bHLH 152..271 CDD:289310 5/12 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3898
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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