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Protein Alignment Oli and neurog3
DIOPT Version :9
Sequence 1: | NP_001188830.1 |
Gene: | Oli / 35066 |
FlyBaseID: | FBgn0032651 |
Length: | 232 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571890.1 |
Gene: | neurog3 / 114411 |
ZFINID: | ZDB-GENE-010608-4 |
Length: | 208 |
Species: | Danio rerio |
Alignment Length: | 162 |
Identity: | 53/162 - (32%) |
Similarity: | 72/162 - (44%) |
Gaps: | 22/162 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 TPLGS---VGLGGFYAQGMGMSQQP---PTDENKPGPSAPEKPLSPTAAAIAAIAISGGTTTVAV 106
||..| ||..|.:......:.:| .||..|..|....: .|.:|:...|........
Zfish 2 TPRSSCALVGRNGTFKSNWSSASEPKFGSTDMTKSQPIKYNR-----EAELASKEWSFTFREDKT 61
Fly 107 SSGGASGSGSNSGKQKNRQGKTVRLNINARERRRMHDLNDALDELRSVIPYAHSPSVRKLSKIAT 171
|:|......|.|.::.|| |:..|.|.|.|||:||.|||.||||:| ..|...||:||.|
Zfish 62 SNGKLKKLMSTSRQRGNR-----RVKANDRGRHRMHNLNSALDNLRSVLP--TFPDDAKLTKIET 119
Fly 172 LLLAKNYILMQQNALEELRRLLAYIQSTTGAA 203
|..|:|||. ||.|..|:..:::..:..|
Zfish 120 LRFARNYIW----ALSETLRIADHVRQRSNHA 147
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Oli | NP_001188830.1 |
HLH |
134..188 |
CDD:197674 |
29/53 (55%) |
neurog3 | NP_571890.1 |
HLH |
84..135 |
CDD:197674 |
30/56 (54%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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