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Protein Alignment Oli and olig1
DIOPT Version :9
Sequence 1: | NP_001188830.1 |
Gene: | Oli / 35066 |
FlyBaseID: | FBgn0032651 |
Length: | 232 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001018632.1 |
Gene: | olig1 / 100001484 |
ZFINID: | ZDB-GENE-050107-2 |
Length: | 235 |
Species: | Danio rerio |
Alignment Length: | 181 |
Identity: | 60/181 - (33%) |
Similarity: | 84/181 - (46%) |
Gaps: | 58/181 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 110 GASGSGSNSG-------------KQKNRQGKTVRLNINARERRRMHDLNDALDELRSV-IPYAHS 160
|:.|.|||.| :..:.:.:.:|..||:|||:||.|||.|:|.||.| :||:.|
Zfish 29 GSGGPGSNVGSLQGPLRSSKPPRELSSEEQQELRRKINSRERKRMQDLNVAMDALREVMVPYSSS 93
Fly 161 P------------------SVRKLSKIATLLLAKNYILMQQNALEELRRLLAYI---QSTTGAAP 204
| :.|:||||:||:||:||||:..::|:|:||||..: ...:|..|
Zfish 94 PTGVGGALQHPYFPPGAPTTGRRLSKISTLVLARNYILLLGSSLQEMRRLLGEVSIGMGVSGTVP 158
Fly 205 --LDLGAFP-----------------AAAKLQALLQGPHNEP----PTSSS 232
|..|.:| ..||...|.||...|| |.|.|
Zfish 159 RLLLTGGWPFLTGPGQLLLSPPEQQLGVAKCPLLPQGAQEEPLAWGPGSMS 209
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Oli | NP_001188830.1 |
HLH |
134..188 |
CDD:197674 |
32/72 (44%) |
olig1 | NP_001018632.1 |
HLH domain |
62..139 |
|
34/76 (45%) |
HLH |
62..133 |
CDD:278439 |
33/70 (47%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3898 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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