DRSC/TRiP Functional Genomics Resources

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Protein Alignment mEFTs and Tsfm

DIOPT Version :9

Sequence 1:NP_609847.1 Gene:mEFTs / 35060 FlyBaseID:FBgn0032646 Length:318 Species:Drosophila melanogaster
Sequence 2:XP_038935802.1 Gene:Tsfm / 679068 RGDID:1593058 Length:338 Species:Rattus norvegicus


Alignment Length:302 Identity:118/302 - (39%)
Similarity:162/302 - (53%) Gaps:36/302 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LYAG-SGGSGGLEKSALAALRKKTGYTFANCKKALEKHNNDVGLAEKWLHEQAQTLGWSKATKVA 80
            |:|| |..|....|..|..||:.|||:|.|||||||....|:..||.|||:|||..|||||.|:.
  Rat    33 LHAGPSLSSSASSKELLMKLRRTTGYSFVNCKKALETCGGDLKQAEAWLHKQAQKEGWSKAAKLH 97

  Fly    81 DRATAHGLIGVLIRGNRGAMVELNCETDFVARNDTFKRFVDHVA----CMCLQYTD-LTDF---- 136
            .|.|..||||:|...|...:||:|||||||:||..|::.|..||    ..|...|| |:.:    
  Rat    98 GRKTKEGLIGLLQEENTAVLVEVNCETDFVSRNVKFQQLVQQVALGTMAHCQNLTDQLSTYSKGF 162

  Fly   137 --DGDLWKLGFDADALRNLRTEEGRTLGDHLALLIGAIGENATIRRALCFKANNDLKLVGYAH-- 197
              ..:|.:|....|.       || :|.|.|||.||.:|||.:::||...|..:...:..|.|  
  Rat   163 LNSSELSELAAGPDG-------EG-SLKDQLALAIGTLGENMSLKRAAWVKVPSGFYVGSYVHGE 219

  Fly   198 ---PAPTNVGTTEGITQVGKYGAIVAYRSTHPLLDF-EFHKSICQQIVGMKPTKIGEYDKDKPAE 258
               |:..|:       .:|||||:|..::...:.:. |..:.:.|.:|||.|..:|..| |:|  
  Rat   220 MQSPSLQNL-------VLGKYGALVICQTPEQITNLEEVGRRLGQHVVGMAPLSVGSLD-DEP-- 274

  Fly   259 NKDDETCLIHQEYLLDADKTVGEALQEHNCEIVDYHRFECGE 300
            ..:.||.::.|.||||...|:|:.:|.....:||:.||||||
  Rat   275 GGETETRMLPQPYLLDPSITLGQYVQPQGVTVVDFVRFECGE 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mEFTsNP_609847.1 UBA_EF-Ts 32..66 CDD:270461 19/33 (58%)
Tsf 35..303 CDD:223342 111/283 (39%)
EF_TS 98..300 CDD:279261 73/218 (33%)
TsfmXP_038935802.1 tsf 47..317 CDD:236491 112/288 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 79 1.000 Domainoid score I8501
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4184
Inparanoid 1 1.050 177 1.000 Inparanoid score I3934
OMA 1 1.010 - - QHG54697
OrthoDB 1 1.010 - - D1048278at2759
OrthoFinder 1 1.000 - - FOG0003815
OrthoInspector 1 1.000 - - oto97626
orthoMCL 1 0.900 - - OOG6_101036
Panther 1 1.100 - - LDO PTHR11741
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2659
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.980

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